RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SLC10A6Q3KNW5 377 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 LMBRD2Q68DH5 695 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 CNKSR3Q6P9H4 555 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 HACE1Q8IYU2 909 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 PARD3BQ8TEW8 1205 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 FAM84AQ96KN4 292 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 NAP1L5Q96NT1 182 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 TOPORSQ9NS56 1045 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 C1orf112Q9NSG2 853 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 A0A0U1RQF3 1178 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 IL18RAPO95256 599 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 SKIP12755 728 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 ATF7P17544 494 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-207ENST00000550504 TNNI1P19237 187 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
RAB5C-207ENST00000550504 UBASH3AP57075 661 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 KCNH2Q12809 1159 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 PPIGQ13427 754 aaKnown RBP eCLIP11.16□□□□□ -0.621e-6■□□□□ 8.9
RAB5C-207ENST00000550504 IKBKEQ14164 716 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 MIIPQ5JXC2 388 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 C1orf220Q5T0J3 134 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 APTXQ7Z2E3 356 aaKnown RBP11.16□□□□□ -0.62
RAB5C-207ENST00000550504 MRPL10Q7Z7H8 261 aaKnown RBP11.16□□□□□ -0.62
RAB5C-207ENST00000550504 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
RAB5C-207ENST00000550504 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 SLC35C1Q96A29 364 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 SNX27Q96L92 541 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 CGRRF1Q99675 332 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 TRIM5Q9C035 493 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 CXCL16Q9H2A7 254 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 NDST4Q9H3R1 872 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 IL23AQ9NPF7 189 aa11.16□□□□□ -0.62
RAB5C-207ENST00000550504 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-207ENST00000550504 TTC26A0AVF1 554 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 ZNF623O75123 536 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
RAB5C-207ENST00000550504 NFICP08651 508 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 MLH1P40692 756 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 GCLMP48507 274 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 MRE11P49959 708 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 TFAMQ00059 246 aaKnown RBP11.15□□□□□ -0.62
RAB5C-207ENST00000550504 PPP3CAQ08209 521 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 SURF1Q15526 300 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 PTPN21Q16825 1174 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 FILIP1LQ4L180 1135 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 GLRA4Q5JXX5 417 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 JADE1Q6IE81 842 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAB5C-207ENST00000550504 AGMOQ6ZNB7 445 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 USP37Q86T82 979 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 XPO4Q9C0E2 1151 aaKnown RBP11.15□□□□□ -0.62
RAB5C-207ENST00000550504 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.62
RAB5C-207ENST00000550504 LTBP2Q14767 1821 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 LGALS16A8MUM7 142 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 TEX33O43247 280 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CBFA2T2O43439 604 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 STX10O60499 249 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 PFKMP08237 780 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM191BP0C7N4 346 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 FGFR1P11362 822 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ACTN1P12814 892 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 FMO5P49326 533 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ZNF75DP51815 510 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 AFF1P51825 1210 aaKnown RBP11.14□□□□□ -0.63
RAB5C-207ENST00000550504 EPHB4P54760 987 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 FAM189BP81408 668 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 UBXN1Q04323 297 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM132DQ14C87 1099 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CBWD6Q4V339 395 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CBWD3Q5JTY5 395 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CBWD5Q5RIA9 395 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 SARM1Q6SZW1 724 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ZNF365Q70YC5 407 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 C16orf59Q7L2K0 433 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
RAB5C-207ENST00000550504 WDR49Q8IV35 697 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 CD302Q8IX05 232 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 EFCAB13Q8IY85 973 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
RAB5C-207ENST00000550504 OR5B17Q8NGF7 314 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms