RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 FGF14Q92915 247 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 GTF3C6Q969F1 213 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 PRIMPOLQ96LW4 560 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 FZD8Q9H461 694 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 SLC2A4RGQ9NR83 387 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
LETMD1-222ENST00000550274 SNTG2Q9NY99 539 aa13.92□□□□□ -0.18
LETMD1-222ENST00000550274 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
LETMD1-222ENST00000550274 GLULP15104 373 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
LETMD1-222ENST00000550274 ID4P47928 161 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 PSMD5Q16401 504 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 FAM187BQ17R55 369 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 DCLRE1AQ6PJP8 1040 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 PARM1Q6UWI2 310 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 CATSPER3Q86XQ3 398 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 TTPALQ9BTX7 342 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 FOXQ1Q9C009 403 aa13.91□□□□□ -0.18
LETMD1-222ENST00000550274 N4BP3O15049 544 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 CCL16O15467 120 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 LRRN2O75325 713 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 THP07101 528 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 C8AP07357 584 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 ATP2B1P20020 1258 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 GPC5P78333 572 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 LIN9Q5TKA1 542 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 EEF1DP3Q658K8 133 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 PJA1Q8NG27 643 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 CDH7Q9ULB5 785 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 SIT1Q9Y3P8 196 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 ZFP37Q9Y6Q3 630 aaPredicted RBP13.9□□□□□ -0.18
LETMD1-222ENST00000550274 TICRRQ7Z2Z1 1910 aa13.9□□□□□ -0.18
LETMD1-222ENST00000550274 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 LMNAP02545 664 aaKnown RBP13.89□□□□□ -0.19
LETMD1-222ENST00000550274 PRKCBP05771 671 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 HNRNPA1P09651 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
LETMD1-222ENST00000550274 LIG1P18858 919 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 MCM7P33993 719 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 ANAPC15P60006 121 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 ST3GAL1Q11201 340 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
LETMD1-222ENST00000550274 PPM1LQ5SGD2 360 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 ITFG1Q8TB96 612 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 SLC7A14Q8TBB6 771 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 KCNG4Q8TDN1 519 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 FGF13Q92913 245 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 COL4A2P08572 1712 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 ANK1P16157 1881 aa13.89□□□□□ -0.19
LETMD1-222ENST00000550274 F5P12259 2224 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 ACKR2O00590 384 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 SP9P0CG40 484 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 HOXA9P31269 272 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 STARD6P59095 220 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 SNW1Q13573 536 aaKnown RBP13.88□□□□□ -0.19
LETMD1-222ENST00000550274 MAPK6Q16659 721 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 GLRA4Q5JXX5 417 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 AXDND1Q5T1B0 1012 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-222ENST00000550274 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 RSPO2Q6UXX9 243 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-222ENST00000550274 ERMP1Q7Z2K6 904 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 C1orf210Q8IVY1 113 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 NACC1Q96RE7 527 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 POLR3CQ9BUI4 534 aaPredicted RBP13.88□□□□□ -0.19
LETMD1-222ENST00000550274 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 C2orf40Q9H1Z8 148 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 SEMA4AQ9H3S1 761 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 POLD4Q9HCU8 107 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
LETMD1-222ENST00000550274 SPTBN2O15020 2390 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 CYP11B2P19099 503 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 FGFR3P22607 806 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 RPA1P27694 616 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 OR1D2P34982 312 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 NAMPTP43490 491 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 GUCY1B3Q02153 619 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 RAB33AQ14088 237 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 TRIM29Q14134 588 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 MAML2Q8IZL2 1156 aaPredicted RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 DEPTORQ8TB45 409 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 DDX23Q9BUQ8 820 aaKnown RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 GOLGA2P5Q9HBQ8 144 aa13.87□□□□□ -0.19
LETMD1-222ENST00000550274 DNMT3BQ9UBC3 853 aaKnown RBP13.87□□□□□ -0.19
LETMD1-222ENST00000550274 MTRRQ9UBK8 725 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms