RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ATP6V1G3Q96LB4 118 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 SMYD2Q9NRG4 433 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 PDE2AO00408 941 aaPredicted RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 CALB1P05937 261 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 BRD2P25440 801 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 EIF3BP55884 814 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 SARNPP82979 210 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 IL9RQ01113 521 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 SPOUT1Q5T280 376 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 SV2AQ7L0J3 742 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 FAM83AQ86UY5 434 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 TATDN2Q93075 761 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 RASA4BC9J798 803 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 NDC80O14777 642 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 RASA4O43374 803 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 OATP04181 439 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 C6orf118Q5T5N4 469 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 CCDC62Q6P9F0 684 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 SHISA4Q96DD7 197 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 RBM41Q96IZ5 413 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 TLR10Q9BXR5 811 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
CUX1-214ENST00000550008 ABT1Q9ULW3 272 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 DIS3Q9Y2L1 958 aaKnown RBP15.95■□□□□ 0.14
CUX1-214ENST00000550008 SUN1O94901 812 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 CPP00450 1065 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 GLI1P08151 1106 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 RPS12P25398 132 aaKnown RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 GTF2H1P32780 548 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 SEC24CP53992 1094 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 SLC35G1Q2M3R5 365 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 CYP4A22Q5TCH4 519 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 IZUMO3Q5VZ72 239 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 EFCAB12Q6NXP0 572 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 ENOSF1Q7L5Y1 443 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 JAMLQ86YT9 394 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 FBXO16Q8IX29 292 aaPredicted RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 STMN2Q93045 179 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 CFAP57Q96MR6 1250 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 C2orf40Q9H1Z8 148 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 VWA5AO00534 786 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 NAA25Q14CX7 972 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 C1orf228Q6PIY5 440 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 DSTYKQ6XUX3 929 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 FAM49BQ9NUQ9 324 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 GGT7Q9UJ14 662 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 PCDHB2Q9Y5E7 798 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 KRT3P12035 628 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 PSMC4P43686 418 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 EFNA5P52803 228 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 ADCY2Q08462 1091 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 E2F5Q15329 346 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 ARHGEF18Q6ZSZ5 1173 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 CENPUQ71F23 418 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 PRPF31Q8WWY3 499 aaKnown RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 CASKIN2Q8WXE0 1202 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 FNDC3AQ9Y2H6 1198 aaKnown RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 A8MXQ7 604 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 MT-ND3P03897 115 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 CDH6P55285 790 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 KCNMA1Q12791 1236 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 SH3BP5LQ7L8J4 393 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 TMEM139Q8IV31 216 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 MMGT1Q8N4V1 131 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 FAF2Q96CS3 445 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 DBR1Q9UK59 544 aaKnown RBP15.94■□□□□ 0.14
CUX1-214ENST00000550008 TRAF3IP3Q9Y228 551 aa15.94■□□□□ 0.14
CUX1-214ENST00000550008 MAP3K6O95382 1288 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ITGB5P18084 799 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 DLG4P78352 724 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ANKMY2Q8IV38 441 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ZBED8Q8IZ13 594 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ATP2A3Q93084 1043 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 GPRASP2Q96D09 838 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ATP9AO75110 1047 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 RARBP10826 455 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ARSEP51690 589 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 TRAPPC12Q8WVT3 735 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ARL8AQ96BM9 186 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ZBTB45Q96K62 511 aaPredicted RBP15.93■□□□□ 0.14
CUX1-214ENST00000550008 MTMR12Q9C0I1 747 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 PDGFDQ9GZP0 370 aaPredicted RBP15.93■□□□□ 0.14
CUX1-214ENST00000550008 ZNF446Q9NWS9 450 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 BRAFP15056 766 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 PPP2R2AP63151 447 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 PCNX4Q63HM2 1172 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 GPAT2Q6NUI2 795 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
CUX1-214ENST00000550008 YDJCA8MPS7 323 aa15.92■□□□□ 0.14
CUX1-214ENST00000550008 DDX3XO00571 662 aaKnown RBP eCLIP15.92■□□□□ 0.14
CUX1-214ENST00000550008 CTSHP09668 335 aa15.92■□□□□ 0.14
CUX1-214ENST00000550008 SPATA31C1P0DKV0 1188 aa15.92■□□□□ 0.14
CUX1-214ENST00000550008 SESN3P58005 492 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms