RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
CDK4-206ENST00000549606 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
CDK4-206ENST00000549606 KCNK12Q9HB15 430 aa17.32■□□□□ 0.36
CDK4-206ENST00000549606 KMT5AQ9NQR1 393 aa17.32■□□□□ 0.36
CDK4-206ENST00000549606 TNFSF13BQ9Y275 285 aa17.32■□□□□ 0.36
CDK4-206ENST00000549606 PHLPP2Q6ZVD8 1323 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 SFI1A8K8P3 1242 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 N4BP1O75113 896 aaKnown RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 C1RP00736 705 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 OSTNP61366 133 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 DAW1Q8N136 415 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 LNX1Q8TBB1 728 aaPredicted RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 ZNF707Q96C28 371 aaPredicted RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 PLIN2Q99541 437 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 RHOBTB2Q9BYZ6 727 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 PRKD2Q9BZL6 878 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 TMEM134Q9H6X4 195 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 UPF2Q9HAU5 1272 aaKnown RBP17.31■□□□□ 0.36
CDK4-206ENST00000549606 ZDHHC7Q9NXF8 308 aa17.31■□□□□ 0.36
CDK4-206ENST00000549606 MYH11P35749 1972 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 VWA8A3KMH1 1905 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 CLCNKBP51801 687 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 YARSP54577 528 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 RAD51AP2Q09MP3 1159 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 ELAVL2Q12926 359 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 ZNF568Q3ZCX4 644 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 C1orf186Q6ZWK4 172 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 CEP120Q8N960 986 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 PIK3R5Q8WYR1 880 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 PPP1R10Q96QC0 940 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 CLSTN3Q9BQT9 956 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 TCHPQ9BT92 498 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 TARS2Q9BW92 718 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 GOLGA2P5Q9HBQ8 144 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
CDK4-206ENST00000549606 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
CDK4-206ENST00000549606 VWA3AA6NCI4 1184 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 SLC16A4O15374 487 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 ZMYND10O75800 440 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 B3GAT3O94766 335 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
CDK4-206ENST00000549606 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
CDK4-206ENST00000549606 MAPK7Q13164 816 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 GET4Q7L5D6 327 aaPredicted RBP17.29■□□□□ 0.36
CDK4-206ENST00000549606 FLCNQ8NFG4 579 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 RSAD2Q8WXG1 361 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 CDK5RAP3Q96JB5 506 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 PNMA5Q96PV4 448 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 MYADMQ96S97 322 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 CDT1Q9H211 546 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 FAM86C1Q9NVL1 165 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 ARHGAP28Q9P2N2 729 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 FBXL21Q9UKT6 434 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 DUSP12Q9UNI6 340 aa17.29■□□□□ 0.36
CDK4-206ENST00000549606 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
CDK4-206ENST00000549606 ZDBF2Q9HCK1 2354 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 SMIM28A0A1B0GU29 152 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 H0Y858 1186 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 ADAM12O43184 909 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 HARSP12081 509 aaKnown RBP17.28■□□□□ 0.36
CDK4-206ENST00000549606 GRM5P41594 1212 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 LIN9Q5TKA1 542 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
CDK4-206ENST00000549606 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
CDK4-206ENST00000549606 TAS1R3Q7RTX0 852 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 TMEM105Q8N8V8 129 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 ATOH1Q92858 354 aaPredicted RBP17.28■□□□□ 0.36
CDK4-206ENST00000549606 UROC1Q96N76 676 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 C17orf75Q9HAS0 396 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 PTPRHQ9HD43 1115 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 TOPORSQ9NS56 1045 aaPredicted RBP17.28■□□□□ 0.36
CDK4-206ENST00000549606 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
CDK4-206ENST00000549606 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 NARSO43776 548 aaKnown RBP17.27■□□□□ 0.36
CDK4-206ENST00000549606 PAPLNO95428 1278 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 GUCY2CP25092 1073 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 OR1D2P34982 312 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 STRN3Q13033 797 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 UPP1Q16831 310 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 PPM1LQ5SGD2 360 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 GRASPQ7Z6J2 395 aaPredicted RBP17.27■□□□□ 0.36
CDK4-206ENST00000549606 SYT2Q8N9I0 419 aaPredicted RBP17.27■□□□□ 0.36
CDK4-206ENST00000549606 ACAP3Q96P50 834 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK4-206ENST00000549606 EPS15L1Q9UBC2 864 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 POLIQ9UNA4 740 aa17.27■□□□□ 0.36
CDK4-206ENST00000549606 I3L4J1 428 aa17.26■□□□□ 0.35
CDK4-206ENST00000549606 GALR2O43603 387 aaPredicted RBP17.26■□□□□ 0.35
CDK4-206ENST00000549606 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CDK4-206ENST00000549606 C8AP07357 584 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms