RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 CLCN5P51795 746 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 SOX4Q06945 474 aaPredicted RBP16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 PSMD5Q16401 504 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 FRMD5Q7Z6J6 570 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 DAW1Q8N136 415 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 SLC44A3Q8N4M1 653 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 DEPTORQ8TB45 409 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 CA14Q9ULX7 337 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 COL4A2P08572 1712 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 TICRRQ7Z2Z1 1910 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 E9PMD0 336 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 CCL16O15467 120 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 THP07101 528 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 CDC25AP30304 524 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 NBL1P41271 181 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 FXR2P51116 673 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 MAPK7Q13164 816 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 HTR4Q13639 388 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 MAPK6Q16659 721 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 TMEM132AQ24JP5 1023 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 POTEHQ6S545 545 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 GRASPQ7Z6J2 395 aaPredicted RBP16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 CCDC105Q8IYK2 499 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 GPR152Q8TDT2 470 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 PPP1R10Q96QC0 940 aaKnown RBP16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 TTPALQ9BTX7 342 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 RUSC1Q9BVN2 902 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 PLEKHA4Q9H4M7 779 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 PIDD1Q9HB75 910 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 DDX19AQ9NUU7 478 aaKnown RBP16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 ZDHHC7Q9NXF8 308 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 IGSF9Q9P2J2 1179 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.28
SNX29P1-201ENST00000548357 TSC2P49815 1807 aa16.77■□□□□ 0.27
SNX29P1-201ENST00000548357 PRR23AA6NEV1 266 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 ST18O60284 1047 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 LAMP2P13473 410 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 CLCNKBP51801 687 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 NUBP1P53384 320 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 ATF7IP2Q5U623 682 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 FGF14Q92915 247 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 LLPHQ9BRT6 129 aaKnown RBP16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 MMTAG2Q9BU76 263 aaKnown RBP16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 HCFC1R1Q9NWW0 138 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
SNX29P1-201ENST00000548357 ANHXE9PGG2 379 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 ABLIM1O14639 778 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 C8AP07357 584 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 TKTP29401 623 aaKnown RBP16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 BRCC3P46736 316 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 PTGDRQ13258 359 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 ITFG1Q8TB96 612 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 STAMQ92783 540 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 CDT1Q9H211 546 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
SNX29P1-201ENST00000548357 TCHHQ07283 1943 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 KIF26AQ9ULI4 1882 aaPredicted RBP16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 NRG2O14511 850 aaPredicted RBP16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 HIP1RO75146 1068 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 LRRN2O75325 713 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 SRFP11831 508 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 FGFR3P22607 806 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 FSHRP23945 695 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 NPTX2P47972 431 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 OSTNP61366 133 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 ANGPT1Q15389 498 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 PARM1Q6UWI2 310 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 DTWD2Q8NBA8 298 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 SLC7A14Q8TBB6 771 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 DDX27Q96GQ7 796 aaKnown RBP16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 ZMAT2Q96NC0 199 aaKnown RBP16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 ADPGKQ9BRR6 497 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 TBC1D17Q9HA65 648 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 PTPRHQ9HD43 1115 aa16.74■□□□□ 0.27
SNX29P1-201ENST00000548357 C1RP00736 705 aa16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 MUTP22033 750 aa16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 OR1D2P34982 312 aa16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 RBM25P49756 843 aaKnown RBP16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 PEX3P56589 373 aa16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 PPP2R5AQ15172 486 aa16.73■□□□□ 0.27
SNX29P1-201ENST00000548357 UPP1Q16831 310 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms