RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 C7orf25Q9BPX7 421 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 RHOXF2Q9BQY4 288 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 CRACR2AQ9BSW2 395 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
CDK4-205ENST00000547853 TTYH3Q9C0H2 523 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 NUCKS1Q9H1E3 243 aaKnown RBP10.67□□□□□ -0.7
CDK4-205ENST00000547853 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 MLXIPQ9HAP2 919 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
CDK4-205ENST00000547853 JRKLQ9Y4A0 524 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 CDY2AQ9Y6F7 541 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 DOCK8Q8NF50 2099 aa10.67□□□□□ -0.7
CDK4-205ENST00000547853 CACNA1IQ9P0X4 2223 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 NRCAMQ92823 1304 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 MBLAC1A4D2B0 266 aaPredicted RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 FAM205CA6NFA0 338 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 MYO1CO00159 1063 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 SLC26A4O43511 780 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 PPP1R11O60927 126 aaPredicted RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 NPR3P17342 541 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 HOXB8P17481 243 aaPredicted RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 TRIM21P19474 475 aaKnown RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 TNFRSF8P28908 595 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 NNTQ13423 1086 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 GRM4Q14833 912 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 TTI2Q6NXR4 508 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 CMTR1Q8N1G2 835 aaKnown RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 SECISBP2LQ93073 1101 aaKnown RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 TUBGCP2Q9BSJ2 902 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 MFSD1Q9H3U5 465 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 ZSWIM4Q9H7M6 989 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 TMEM51Q9NW97 253 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 STK17AQ9UEE5 414 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
CDK4-205ENST00000547853 RRP15Q9Y3B9 282 aaKnown RBP10.66□□□□□ -0.7
CDK4-205ENST00000547853 PVALEFA0A1B0GWK0 134 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 HIDE1A8MVS5 230 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 M0R2N6 131 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 PI15O43692 258 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 KLRC4O43908 158 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 OPA1O60313 960 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 FGF18O76093 207 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 LMNAP02545 664 aaKnown RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 GNA11P29992 359 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 CCND2P30279 289 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 HOXA13P31271 388 aaPredicted RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 MRPS6P82932 125 aaKnown RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 ASPRV1Q53RT3 343 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 PLPP4Q5VZY2 271 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 PDE12Q6L8Q7 609 aaKnown RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 LLGL2Q6P1M3 1020 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 IRF2BP1Q8IU81 584 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 CSGALNACT2Q8N6G5 542 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 TDRD5Q8NAT2 981 aaKnown RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 DTWD2Q8NBA8 298 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 FLCNQ8NFG4 579 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDK4-205ENST00000547853 NECTIN4Q96NY8 510 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 INPP4AQ96PE3 977 aaPredicted RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 MTRQ99707 1265 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 FTHL17Q9BXU8 183 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 JMJD4Q9H9V9 463 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 HPCAL4Q9UM19 191 aa10.65□□□□□ -0.7
CDK4-205ENST00000547853 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
CDK4-205ENST00000547853 EVPLQ92817 2033 aa10.65□□□□□ -0.71
CDK4-205ENST00000547853 IGSF9BQ9UPX0 1349 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 SHOX2O60902 331 aaPredicted RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 RNF40O75150 1001 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 LCA5LO95447 670 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 MAGEA9P43362 315 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 TNNT3P45378 269 aaPredicted RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 LRRC63Q05C16 580 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 TBC1D8BQ0IIM8 1120 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 PPFIA1Q13136 1202 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 PSMD2Q13200 908 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 GRIK4Q16099 956 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 MARCH8Q5T0T0 291 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 ALS2CLQ60I27 953 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 CYFIP1Q7L576 1253 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 SPATS2Q86XZ4 545 aaKnown RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 ZDHHC14Q8IZN3 488 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 RNF10Q8N5U6 811 aaKnown RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 COLGALT1Q8NBJ5 622 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 NOA1Q8NC60 698 aaKnown RBP10.64□□□□□ -0.71
CDK4-205ENST00000547853 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 MICAL1Q8TDZ2 1067 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 DNAJB3Q8WWF6 145 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
CDK4-205ENST00000547853 CCDC42Q96M95 316 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms