RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 CASTOR2A6NHX0 329 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 ANKRD63C9JTQ0 380 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 LINC01565O15544 149 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 MEFVO15553 781 aaPredicted RBP20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 GCNT3O95395 438 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 CXCL14O95715 111 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 SLFN14P0C7P3 912 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 MYBP10242 640 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 KCNA5P22460 613 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 CASP1P29466 404 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 AFMP43652 599 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 KCNA1Q09470 495 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 ADAM15Q13444 863 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 SMC1AQ14683 1233 aaKnown RBP20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 CEP57L1Q8IYX8 460 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 SNX27Q96L92 541 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 BLZF1Q9H2G9 400 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 IKZF4Q9H2S9 585 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
PRPF40B-206ENST00000547764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 A0A0B4J269 797 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 FAM237AA0A1B0GTK4 181 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 A0A1W2PQ27 194 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 A0A1W2PQ64 194 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 A0A1W2PQD8 194 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 C2orf71A6NGG8 1288 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 TISP43B9A030 160 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 ACTN4O43707 911 aaKnown RBP20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 EFEMP2O95967 443 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 CLTAP09496 248 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 CTSAP10619 480 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 LTBRP36941 435 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 BMS1Q14692 1282 aaKnown RBP20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 DUSP6Q16828 381 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 AAK1Q2M2I8 961 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 GRAMD1CQ8IYS0 662 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 EFHBQ8N7U6 833 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 AUTS2Q8WXX7 1259 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 HPS3Q969F9 1004 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 ZMAT2Q96NC0 199 aaKnown RBP20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 ACCSQ96QU6 501 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 MSTO1Q9BUK6 570 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 STK39Q9UEW8 545 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 PCDHB13Q9Y5F0 798 aa20.45■□□□□ 0.86
PRPF40B-206ENST00000547764 FAM189A1O60320 539 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 KCNE1P15382 129 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 CA8P35219 290 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 TNFSF9P41273 254 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 KCNQ1P51787 676 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 NDUFA8P51970 172 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 DLX2Q07687 328 aaPredicted RBP20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 CUL4BQ13620 913 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 ALCAMQ13740 583 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 HSP90AA2PQ14568 343 aaPredicted RBP20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 TJAP1Q5JTD0 557 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 ZBTB41Q5SVQ8 909 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 TAS1R1Q7RTX1 841 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 RNF168Q8IYW5 571 aaPredicted RBP20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 FSIP1Q8NA03 581 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 PAGE5Q96GU1 130 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 CDCA3Q99618 268 aaPredicted RBP20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 CNTN3Q9P232 1028 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 USP25Q9UHP3 1055 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 ADAM28Q9UKQ2 775 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 EXOC7Q9UPT5 735 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 IRAK3Q9Y616 596 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 STYXL1Q9Y6J8 313 aa20.44■□□□□ 0.86
PRPF40B-206ENST00000547764 CITO14578 2027 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 H3BQ06 376 aaPredicted RBP20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 OGTO15294 1046 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 SOD2P04179 222 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 CXCL8P10145 99 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 SYKP43405 635 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 KYAT1Q16773 422 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 LEXMQ3ZCV2 418 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 SLFN12LQ6IEE8 588 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 UNC13DQ70J99 1090 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 GLIS3Q8NEA6 775 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 HERC2P3Q9BVR0 1158 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 GPR62Q9BZJ7 368 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 GOLPH3LQ9H4A5 285 aa20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 CIZ1Q9ULV3 898 aaPredicted RBP20.43■□□□□ 0.86
PRPF40B-206ENST00000547764 TBX10O75333 385 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 TADA2AO75478 443 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 PRPF6O94906 941 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 KIF4AO95239 1232 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 GLP2RO95838 553 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 ADSSP30520 456 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 RBM10P98175 930 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 SOX4Q06945 474 aaPredicted RBP20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 PTPN14Q15678 1187 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 FUT10Q6P4F1 479 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 HASPINQ8TF76 798 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms