RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NKX3-2P78367 333 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 TRPC3Q13507 836 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 WHAMMP3Q1A5X7 153 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 CYP4F22Q6NT55 531 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF571Q7Z3V5 609 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ZBTB33Q86T24 672 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 RSPH3Q86UC2 560 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF677Q86XU0 584 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 FAM71AQ8IYT1 594 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 C7orf31Q8N865 590 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 PLEKHO2Q8TD55 490 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ANKRD36BP1Q96IX9 119 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 CAPNS2Q96L46 248 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 WDR24Q96S15 920 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 FDXACB1Q9BRP7 624 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 FAM124BQ9H5Z6 455 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 ASB7Q9H672 318 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 IFT122Q9HBG6 1241 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 PDE11AQ9HCR9 933 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 CDC23Q9UJX2 597 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 NAGPAQ9UK23 515 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 A0A087X0T9 212 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 C17orf102A2RUQ5 167 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 SEPT4O43236 478 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 CTIFO43310 598 aaKnown RBP14.48□□□□□ -0.09
PTCH1-215ENST00000547672 HLA-DRAP01903 254 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 FAM228BP0C875 321 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 CYP2C9P11712 490 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 GZMAP12544 262 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 ENOX2Q16206 610 aaKnown RBP14.48□□□□□ -0.09
PTCH1-215ENST00000547672 CCL14Q16627 93 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 MARCH8Q5T0T0 291 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 SLC35F6Q8N357 371 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 TAS1R2Q8TE23 839 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 SHC3Q92529 594 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 RPGRIP1Q96KN7 1286 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 POP1Q99575 1024 aaKnown RBP14.48□□□□□ -0.09
PTCH1-215ENST00000547672 AGPAT1Q99943 283 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 UPF3AQ9H1J1 476 aaKnown RBP14.48□□□□□ -0.09
PTCH1-215ENST00000547672 PLEKHA5Q9HAU0 1116 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 SETD4Q9NVD3 440 aa14.48□□□□□ -0.09
PTCH1-215ENST00000547672 MGAMO43451 1857 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 M0QZ92 97 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF263O14978 683 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 TMEM191BP0C7N4 346 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 HARSP12081 509 aaKnown RBP14.47□□□□□ -0.09
PTCH1-215ENST00000547672 P4HA1P13674 534 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 USP8P40818 1118 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 FLT3LGP49771 235 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 APLP1P51693 650 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 PRMT2P55345 433 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 APBA1Q02410 837 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 CKAP4Q07065 602 aaKnown RBP14.47□□□□□ -0.09
PTCH1-215ENST00000547672 NCOA4Q13772 614 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 GJB7Q6PEY0 223 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 SYCE1Q8N0S2 351 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 TTC39CQ8N584 583 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 SLC30A5Q8TAD4 765 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 HELQQ8TDG4 1101 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 CCDC94Q9BW85 323 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-215ENST00000547672 DNAI2Q9GZS0 605 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 LACRTQ9GZZ8 138 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 RNF14Q9UBS8 474 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-215ENST00000547672 SAR1BQ9Y6B6 198 aa14.47□□□□□ -0.09
PTCH1-215ENST00000547672 EVPLQ92817 2033 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 A0A1B0GUA9 196 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 MACROD2A1Z1Q3 448 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 EFCAB8A8MWE9 144 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 VTNP04004 478 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 TUBBP07437 444 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 C6orf222P0C671 652 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 CYBAP13498 195 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 TCP1P17987 556 aaKnown RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 ATICP31939 592 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 PDE6CP51160 858 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 PAPD7Q5XG87 772 aaKnown RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 NOTUMQ6P988 496 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 ARHGEF19Q8IW93 802 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 THNSL1Q8IYQ7 743 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 PCSK9Q8NBP7 692 aaKnown RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 U2AF1L4Q8WU68 220 aaKnown RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 CTNNBL1Q8WYA6 563 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF516Q92618 1163 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 KAT2BQ92831 832 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 SEMA4DQ92854 862 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 ACAP3Q96P50 834 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 HAPLN2Q9GZV7 340 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 DERAQ9Y315 318 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 MRFAP1Q9Y605 127 aa14.46□□□□□ -0.09
PTCH1-215ENST00000547672 DOCK3Q8IZD9 2030 aa14.46□□□□□ -0.1
PTCH1-215ENST00000547672 ANKRD62A6NC57 917 aa14.45□□□□□ -0.1
PTCH1-215ENST00000547672 ABLIM1O14639 778 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms