RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 COL25A1Q9BXS0 654 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 PANK4Q9NVE7 773 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 KBTBD4Q9NVX7 518 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 BARX2Q9UMQ3 279 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 FRMD3A2A2Y4 597 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 TISP43B9A030 160 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 C2CD2LO14523 706 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 PPP1R37O75864 691 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 KIF4AO95239 1232 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 CXCL14O95715 111 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 URODP06132 367 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 CXCL8P10145 99 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 MYBP10242 640 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 PFKFB1P16118 471 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 LTBRP36941 435 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 CASP5P51878 434 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 COASYQ13057 564 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 ADAM15Q13444 863 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 PTPN14Q15678 1187 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 NAB2Q15742 525 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 FUT10Q6P4F1 479 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 HVCN1Q96D96 273 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
RAB5C-204ENST00000547517 FGFBP2Q9BYJ0 223 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 IKZF4Q9H2S9 585 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 MAGEF1Q9HAY2 307 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 GOLGA2P5Q9HBQ8 144 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 KCNH3Q9ULD8 1083 aa12.92□□□□□ -0.34
RAB5C-204ENST00000547517 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 A0A1B0GVL5 298 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 SOD2P04179 222 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 BMP1P13497 986 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 CASP1P29466 404 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 TNFSF9P41273 254 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 GLUD2P49448 558 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 NUCB2P80303 420 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 AMPD3Q01432 767 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 KCNA1Q09470 495 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 ZBTB41Q5SVQ8 909 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 PTCRAQ6ISU1 281 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 TAS1R1Q7RTX1 841 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 B3GALT6Q96L58 329 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 ZMAT2Q96NC0 199 aaKnown RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 NECAB3Q96P71 396 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-204ENST00000547517 BLZF1Q9H2G9 400 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 CLEC1BQ9P126 229 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 CNTN3Q9P232 1028 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 ADAM28Q9UKQ2 775 aa12.91□□□□□ -0.34
RAB5C-204ENST00000547517 SF3B1O75533 1304 aaKnown RBP eCLIP12.9□□□□□ -0.348e-6■■■■■ 107
RAB5C-204ENST00000547517 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 OGTO15294 1046 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CLASP2O75122 1294 aaKnown RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 TADA2AO75478 443 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CLTAP09496 248 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 IL9P15248 144 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CMA1P23946 247 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 AFMP43652 599 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CLCNKBP51801 687 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 ALCAMQ13740 583 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 XKR4Q5GH76 650 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 ALKAL1Q6UXT8 129 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 HPS3Q969F9 1004 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 GPR62Q9BZJ7 368 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
RAB5C-204ENST00000547517 SLC38A7Q9NVC3 462 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 SERTAD1Q9UHV2 236 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
RAB5C-204ENST00000547517 CITO14578 2027 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms