RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RAD51AP2Q09MP3 1159 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 ALKAL1Q6UXT8 129 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 HDAC7Q8WUI4 952 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 SMG7Q92540 1137 aaKnown RBP14.67□□□□□ -0.06
CPSF6-204ENST00000547486 PPP1R10Q96QC0 940 aaKnown RBP14.67□□□□□ -0.06
CPSF6-204ENST00000547486 NTPCRQ9BSD7 190 aaKnown RBP14.67□□□□□ -0.06
CPSF6-204ENST00000547486 TTPALQ9BTX7 342 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 TARS2Q9BW92 718 aaKnown RBP14.67□□□□□ -0.06
CPSF6-204ENST00000547486 RHOBTB2Q9BYZ6 727 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 CDT1Q9H211 546 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 PLEKHA4Q9H4M7 779 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 KCNK12Q9HB15 430 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 GOLGA2P5Q9HBQ8 144 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 KMT5AQ9NQR1 393 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 DPP7Q9UHL4 492 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 KIF3AQ9Y496 699 aa14.67□□□□□ -0.06
CPSF6-204ENST00000547486 SMIM28A0A1B0GU29 152 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 VWA3AA6NCI4 1184 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 H3BQV1 296 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 SLC16A4O15374 487 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 MEFVO15553 781 aaPredicted RBP14.66□□□□□ -0.06
CPSF6-204ENST00000547486 MRE11P49959 708 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 CLCNKBP51801 687 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
CPSF6-204ENST00000547486 UPP1Q16831 310 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 XKR4Q5GH76 650 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 HYIQ5T013 277 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 CYP26C1Q6V0L0 522 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 SYT2Q8N9I0 419 aaPredicted RBP14.66□□□□□ -0.06
CPSF6-204ENST00000547486 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 PIK3R5Q8WYR1 880 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 ZBTB45Q96K62 511 aaPredicted RBP14.66□□□□□ -0.06
CPSF6-204ENST00000547486 MYADMQ96S97 322 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 PRKD2Q9BZL6 878 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 PHLPP2Q6ZVD8 1323 aa14.66□□□□□ -0.06
CPSF6-204ENST00000547486 MYO10Q9HD67 2058 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 TDRD15B5MCY1 1934 aaKnown RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 NPHP3-ACAD11A0A0J9YXS1 232 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 ZMYND10O75800 440 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 B3GAT3O94766 335 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 FGFR3P22607 806 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 PROZP22891 400 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 GUCY2CP25092 1073 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 GRM5P41594 1212 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 CREMQ03060 361 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 DMP1Q13316 513 aaPredicted RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 TDGQ13569 410 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 PSMD5Q16401 504 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 DCLRE1AQ6PJP8 1040 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 RSPO2Q6UXX9 243 aaPredicted RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 TMEM105Q8N8V8 129 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 C3orf58Q8NDZ4 430 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 DRC1Q96MC2 740 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 ZMAT2Q96NC0 199 aaKnown RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 TBC1D32Q96NH3 1257 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 MRPL4Q9BYD3 311 aaKnown RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 C17orf75Q9HAS0 396 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 ZDHHC7Q9NXF8 308 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
CPSF6-204ENST00000547486 CLUHO75153 1309 aa14.65□□□□□ -0.06
CPSF6-204ENST00000547486 PLXNA3P51805 1871 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 I3L4J1 428 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 NARSO43776 548 aaKnown RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 PLS3P13797 630 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 GBP2P32456 591 aaPredicted RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 PTPN5P54829 565 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 ELAVL2Q12926 359 aaKnown RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 ZNF568Q3ZCX4 644 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 ARSHQ5FYA8 562 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 LARP1BQ659C4 914 aaKnown RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 ARL6IP4Q66PJ3 421 aaKnown RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 TMEM161BQ8NDZ6 487 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 ST13P5Q8NFI4 369 aaPredicted RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 LRRC15Q8TF66 581 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 CCDC94Q9BW85 323 aaPredicted RBP14.64□□□□□ -0.07
CPSF6-204ENST00000547486 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 EPS15L1Q9UBC2 864 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 FBXW11Q9UKB1 542 aa14.64□□□□□ -0.07
CPSF6-204ENST00000547486 TMEM189-UBE2V1I3L0A0 370 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 MAPTP10636 758 aaKnown RBP14.63□□□□□ -0.07
CPSF6-204ENST00000547486 MCF2P10911 925 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 NPR3P17342 541 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 OR1D2P34982 312 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 BRCC3P46736 316 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 MCM2P49736 904 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 YARSP54577 528 aaKnown RBP14.63□□□□□ -0.07
CPSF6-204ENST00000547486 NTHL1P78549 312 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
CPSF6-204ENST00000547486 GRIN1Q05586 938 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 SEZ6Q53EL9 994 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 MPZL3Q6UWV2 235 aa14.63□□□□□ -0.07
CPSF6-204ENST00000547486 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
CPSF6-204ENST00000547486 APBB1IPQ7Z5R6 666 aaPredicted RBP14.63□□□□□ -0.07
CPSF6-204ENST00000547486 SLC44A3Q8N4M1 653 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms