RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CPSF3Q9UKF6 684 aaKnown RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 PCDHGC5Q9Y5F6 944 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 ANKRD63C9JTQ0 380 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 F8W810 466 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
GCN1-202ENST00000547263 OGTO15294 1046 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
GCN1-202ENST00000547263 C1RP00736 705 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 SOD2P04179 222 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 CLTAP09496 248 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 BMP1P13497 986 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 NDUFA8P51970 172 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 LEXMQ3ZCV2 418 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
GCN1-202ENST00000547263 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
GCN1-202ENST00000547263 ENGASEQ8NFI3 743 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 ZNF507Q8TCN5 953 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 TMEM174Q8WUU8 243 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 ACAP3Q96P50 834 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 ASB2Q96Q27 587 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 RPS6KC1Q96S38 1066 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 PAAF1Q9BRP4 392 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 MRPL44Q9H9J2 332 aaKnown RBP11.95□□□□□ -0.5
GCN1-202ENST00000547263 SERTAD1Q9UHV2 236 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 GDAQ9Y2T3 454 aa11.95□□□□□ -0.5
GCN1-202ENST00000547263 UBE4BO95155 1302 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 HIDE1A8MVS5 230 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 TISP43B9A030 160 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 TBX10O75333 385 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 MYBP10242 640 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
GCN1-202ENST00000547263 TNFSF9P41273 254 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 LIG4P49917 911 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 DSG1Q02413 1049 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 SOX4Q06945 474 aaPredicted RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 SMC1AQ14683 1233 aaKnown RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 ENOX2Q16206 610 aaKnown RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 UPP1Q16831 310 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 ZBTB41Q5SVQ8 909 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 KIAA0319Q5VV43 1072 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 SLFN12LQ6IEE8 588 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 VPS52Q8N1B4 723 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 MICALL1Q8N3F8 863 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 GLIS3Q8NEA6 775 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 VN1R2Q8NFZ6 395 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 PPM1EQ8WY54 764 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 PPP2R3CQ969Q6 453 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 PAGE5Q96GU1 130 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 UROC1Q96N76 676 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 COLEC11Q9BWP8 271 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 GPR62Q9BZJ7 368 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 IKZF4Q9H2S9 585 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 ZHX3Q9H4I2 956 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 RXFP1Q9HBX9 757 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 CLEC1BQ9P126 229 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 ANKFY1Q9P2R3 1169 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
GCN1-202ENST00000547263 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 MTCL1Q9Y4B5 1905 aaKnown RBP11.94□□□□□ -0.5
GCN1-202ENST00000547263 PLXNA3P51805 1871 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 UNC80Q8N2C7 3258 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 KIF4AO95239 1232 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 GCNT3O95395 438 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 IDEP14735 1019 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 CYP3A5P20815 502 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 GARTP22102 1010 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 CASP1P29466 404 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 LRPAP1P30533 357 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 SYKP43405 635 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 OR1G1P47890 313 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 YARSP54577 528 aaKnown RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 TFF2Q03403 129 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 DLX2Q07687 328 aaPredicted RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 CUL4BQ13620 913 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 POSTNQ15063 836 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 TMEM132AQ24JP5 1023 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 FAM26FQ5R3K3 315 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 FUT10Q6P4F1 479 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 CD302Q8IX05 232 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 FMR1NBQ8N0W7 255 aaPredicted RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 TMEM87AQ8NBN3 555 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.93□□□□□ -0.5
GCN1-202ENST00000547263 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 ACCSQ96QU6 501 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 TCHPQ9BT92 498 aa11.93□□□□□ -0.5
GCN1-202ENST00000547263 TMEM206Q9H813 350 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms