RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PAK1Q13153 545 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 ANKRD40Q6AI12 368 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 ALKAL1Q6UXT8 129 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 FIBCD1Q8N539 461 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 GSTCDQ8NEC7 633 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 TBC1D13Q9NVG8 400 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 MIOSQ9NXC5 875 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 CTNND2Q9UQB3 1225 aa25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 YBX2Q9Y2T7 364 aaKnown RBP25.21■■□□□ 1.63
SMARCD1-203ENST00000547247 CITO14578 2027 aa25.2■■□□□ 1.63
SMARCD1-203ENST00000547247 TTC26A0AVF1 554 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 LCHNA4D1U4 455 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 TRIM49BA6NDI0 452 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 ZNF233A6NK53 670 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 POMCP01189 267 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 RNASELQ05823 741 aaKnown RBP25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 PPP2R3AQ06190 1150 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 ADAM9Q13443 819 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 XKR4Q5GH76 650 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 FAM212AQ96EL1 285 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 ANO10Q9NW15 660 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 CNTN3Q9P232 1028 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 SZT2Q5T011 3432 aa25.2■■□□□ 1.62
SMARCD1-203ENST00000547247 MEFVO15553 781 aaPredicted RBP25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 CA3P07451 260 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 ADRB2P07550 413 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 SNRNP35Q16560 246 aaKnown RBP25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 FOXR2Q6PJQ5 311 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 CBWD2Q8IUF1 395 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 BRSK2Q8IWQ3 736 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 CD302Q8IX05 232 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 RDH13Q8NBN7 331 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 CXCL16Q9H2A7 254 aa25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 RBAKQ9NYW8 714 aaPredicted RBP25.19■■□□□ 1.62
SMARCD1-203ENST00000547247 LACTBL1A8MY62 500 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 PTGESO14684 152 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 THP07101 528 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 DNAJB2P25686 324 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 FKBP3Q00688 224 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 GRIK3Q13003 919 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 STX1AQ16623 288 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 LRRC55Q6ZSA7 311 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 ASB7Q9H672 318 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 FRMD4BQ9Y2L6 1034 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 SMIM28A0A1B0GU29 152 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 IL18RAPO95256 599 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 KCNE1P15382 129 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 STX17P56962 302 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 CT47A1Q5JQC4 288 aaPredicted RBP25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 GLRA4Q5JXX5 417 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 CEP135Q66GS9 1140 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 TTI2Q6NXR4 508 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 FAM193BQ96PV7 902 aaPredicted RBP25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 NKX2-4Q9H2Z4 354 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 RWDD2AQ9UIY3 292 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 PLAGL2Q9UPG8 496 aa25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 MRPL42Q9Y6G3 142 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-203ENST00000547247 LINC01553A4QN01 128 aa25.17■■□□□ 1.62
SMARCD1-203ENST00000547247 CETN3O15182 167 aa25.17■■□□□ 1.62
SMARCD1-203ENST00000547247 SPOUT1Q5T280 376 aaKnown RBP25.17■■□□□ 1.62
SMARCD1-203ENST00000547247 TSPAN18Q96SJ8 248 aa25.17■■□□□ 1.62
SMARCD1-203ENST00000547247 SLC28A3Q9HAS3 691 aa25.17■■□□□ 1.62
SMARCD1-203ENST00000547247 CASP4P49662 377 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 TYRO3Q06418 890 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 TIFAQ96CG3 184 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 ZMAT2Q96NC0 199 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 PPP1R10Q96QC0 940 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 CWH43Q9H720 699 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 SLC38A7Q9NVC3 462 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 HCSTQ9UBK5 93 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 TRIP11Q15643 1979 aa25.16■■□□□ 1.62
SMARCD1-203ENST00000547247 SYCE3A1L190 88 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 TULP1O00294 542 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 DDHD2O94830 711 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 ERCC5P28715 1186 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 SURF1Q15526 300 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 ZNF280BQ86YH2 543 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 ZC3H3Q8IXZ2 948 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 CLP1Q92989 425 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 DUSP9Q99956 384 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 NRDE2Q9H7Z3 1164 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 TDRD15B5MCY1 1934 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 RALGAPA2Q2PPJ7 1873 aa25.15■■□□□ 1.62
SMARCD1-203ENST00000547247 MAPK13O15264 365 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 AKAP3O75969 853 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 ARHGEF15O94989 841 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 CCDC192P0DO97 292 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 PSMC2P35998 433 aaKnown RBP25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 TAP1Q03518 808 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 SPAG1Q07617 926 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 CYP24A1Q07973 514 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 ZSCAN23Q3MJ62 389 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 PPP2R2DQ66LE6 453 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 JADE1Q6IE81 842 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 KIF12Q96FN5 646 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 MFSD14AQ96MC6 490 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 PDE11AQ9HCR9 933 aa25.14■■□□□ 1.62
SMARCD1-203ENST00000547247 ZC3H11AO75152 810 aaKnown RBP eCLIP25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 DSC1Q08554 894 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms