RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
TMEM116-203ENST00000546537 CCDC51Q96ER9 411 aa12.05□□□□□ -0.48
TMEM116-203ENST00000546537 PAAF1Q9BRP4 392 aa12.05□□□□□ -0.48
TMEM116-203ENST00000546537 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
TMEM116-203ENST00000546537 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
TMEM116-203ENST00000546537 DSPP15924 2871 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ESYT2A0FGR8 921 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 NRG2O14511 850 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 GIPC1O14908 333 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 EDIL3O43854 480 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 TSPAN1O60635 241 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PSMD10O75832 226 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ERLIN2O94905 339 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 TOP3BO95985 862 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PSMC3P17980 439 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 GDI1P31150 447 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 MLLT6P55198 1093 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ZNF252P-AS1Q0IIN9 211 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 LAMTOR4Q0VGL1 99 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 LRRC32Q14392 662 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PCBP1Q15365 356 aaKnown RBP eCLIP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 FAM78AQ5JUQ0 283 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PRSS36Q5K4E3 855 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PLA2G4FQ68DD2 849 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 RNF43Q68DV7 783 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 APOA5Q6Q788 366 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 B3GNT9Q6UX72 402 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 VITQ6UXI7 678 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 REXO1Q8N1G1 1221 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 HASPINQ8TF76 798 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PSPC1Q8WXF1 523 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 GJA10Q969M2 543 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 APOL6Q9BWW8 343 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
TMEM116-203ENST00000546537 SDK1Q7Z5N4 2213 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
TMEM116-203ENST00000546537 ADAMTS20P59510 1910 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 ARID2Q68CP9 1835 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 SGSM2O43147 1006 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 PTPN2P17706 415 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 AKAP5P24588 427 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 CHMLP26374 656 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 HOXC13P31276 330 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 OR1D2P34982 312 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-203ENST00000546537 WDR44Q5JSH3 913 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 C1orf228Q6PIY5 440 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 Q6ZS52 159 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 CACNA2D4Q7Z3S7 1137 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 GAB3Q8WWW8 586 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 SLC7A3Q8WY07 619 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 TMEM143Q96AN5 459 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 MSANTD3Q96H12 275 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 CPB2Q96IY4 423 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 ASB16Q96NS5 453 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 SCNM1Q9BWG6 230 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
TMEM116-203ENST00000546537 SMOC1Q9H4F8 434 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 DHX33Q9H6R0 707 aaKnown RBP12.03□□□□□ -0.48
TMEM116-203ENST00000546537 C6orf50Q9HD87 102 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 RBM12Q9NTZ6 932 aaKnown RBP12.03□□□□□ -0.48
TMEM116-203ENST00000546537 DMXL2Q8TDJ6 3036 aa12.03□□□□□ -0.48
TMEM116-203ENST00000546537 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.49
TMEM116-203ENST00000546537 ARNTLO00327 626 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 ASAP2O43150 1006 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 MICAL2O94851 1124 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 KIF4AO95239 1232 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.49
TMEM116-203ENST00000546537 MPLP40238 635 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 TUSC3Q13454 348 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 RTN1Q16799 776 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 DGKKQ5KSL6 1271 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 KBTBD6Q86V97 674 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 EXOC8Q8IYI6 725 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
TMEM116-203ENST00000546537 RNF149Q8NC42 400 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 DEPDC1BQ8WUY9 529 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 TRIM6Q9C030 488 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-203ENST00000546537 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 ITPR1Q14643 2758 aa12.02□□□□□ -0.49
TMEM116-203ENST00000546537 LAMA5O15230 3695 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 CCDC163A0A0D9SF12 145 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 ARHGEF37A1IGU5 675 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 ZNF263O14978 683 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
TMEM116-203ENST00000546537 GNA11P29992 359 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 USP11P51784 963 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 NPEPPSP55786 919 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 PSMC5P62195 406 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 SPIRE1Q08AE8 756 aa12.01□□□□□ -0.49
TMEM116-203ENST00000546537 NCBP1Q09161 790 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms