RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SPATA31D3P0C874 917 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 IGFBP6P24592 240 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-210ENST00000545493 GRM5P41594 1212 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 SPATA31D4Q6ZUB0 917 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 PALB2Q86YC2 1186 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 SYT2Q8N9I0 419 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-210ENST00000545493 ZNF707Q96C28 371 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-210ENST00000545493 TARS2Q9BW92 718 aaKnown RBP23.2■■□□□ 1.3
SCARB1-210ENST00000545493 RHOBTB2Q9BYZ6 727 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 NT5C3AQ9H0P0 336 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 C17orf75Q9HAS0 396 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 GOLGA2P5Q9HBQ8 144 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 ZDBF2Q9HCK1 2354 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 SFI1A8K8P3 1242 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 PLA2G4BP0C869 781 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 CREMQ03060 361 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 CUL4AQ13619 759 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 FAM171A1Q5VUB5 890 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 LARP1BQ659C4 914 aaKnown RBP23.19■■□□□ 1.3
SCARB1-210ENST00000545493 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 FBXL6Q8N531 539 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 PIK3R5Q8WYR1 880 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 TTPALQ9BTX7 342 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 KCNH6Q9H252 994 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 CITO14578 2027 aa23.19■■□□□ 1.3
SCARB1-210ENST00000545493 MYO10Q9HD67 2058 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 CLUHO75153 1309 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 CCDC195A0A1B0GUA6 201 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 TMEM189-UBE2V1I3L0A0 370 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 MEFVO15553 781 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 N4BP1O75113 896 aaKnown RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 C1RP00736 705 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 PDGFBP01127 241 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 HOXD11P31277 338 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 CACNB1Q02641 598 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 GRIN1Q05586 938 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 SOX4Q06945 474 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 PSMD5Q16401 504 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 CD300LGQ6UXG3 332 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 KCTD17Q8N5Z5 321 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 C3orf58Q8NDZ4 430 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 LNX1Q8TBB1 728 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 HDAC7Q8WUI4 952 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 SPIRE2Q8WWL2 714 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 CDK5RAP3Q96JB5 506 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 SNX27Q96L92 541 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-210ENST00000545493 LIMD1Q9UGP4 676 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 DPP7Q9UHL4 492 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 FBXW11Q9UKB1 542 aa23.18■■□□□ 1.3
SCARB1-210ENST00000545493 DOCK8Q8NF50 2099 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 USP34Q70CQ2 3546 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 NPHP3-ACAD11A0A0J9YXS1 232 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 PLS3P13797 630 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 CLCNKBP51801 687 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 VCPP55072 806 aaKnown RBP23.17■■□□□ 1.3
SCARB1-210ENST00000545493 OSTNP61366 133 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 XKR4Q5GH76 650 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 ELMSAN1Q6PJG2 1045 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 MPZL3Q6UWV2 235 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 APBB1IPQ7Z5R6 666 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-210ENST00000545493 SUGP1Q8IWZ8 645 aaKnown RBP23.17■■□□□ 1.3
SCARB1-210ENST00000545493 UBALD2Q8IYN6 164 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 PLCD3Q8N3E9 789 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 TMEM161BQ8NDZ6 487 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 PRSS33Q8NF86 280 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 AK8Q96MA6 479 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 CLSTN3Q9BQT9 956 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 PLEKHA4Q9H4M7 779 aa23.17■■□□□ 1.3
SCARB1-210ENST00000545493 WDR6Q9NNW5 1121 aaKnown RBP23.17■■□□□ 1.3
SCARB1-210ENST00000545493 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
SCARB1-210ENST00000545493 SMIM28A0A1B0GU29 152 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ADAM12O43184 909 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 MAPTP10636 758 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 MCF2P10911 925 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 HARSP12081 509 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ELAVL2Q12926 359 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 UPP1Q16831 310 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ARSHQ5FYA8 562 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 IER5LQ5T953 404 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ALKAL1Q6UXT8 129 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 OTOP3Q7RTS5 596 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 BRAPQ7Z569 592 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 CEP57Q86XR8 500 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 SMG7Q92540 1137 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ACSF2Q96CM8 615 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ZBTB45Q96K62 511 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ZMAT2Q96NC0 199 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 NTPCRQ9BSD7 190 aaKnown RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 CCDC94Q9BW85 323 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-210ENST00000545493 ZDHHC7Q9NXF8 308 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 KCND2Q9NZV8 630 aa23.16■■□□□ 1.3
SCARB1-210ENST00000545493 FGFR3P22607 806 aa23.15■■□□□ 1.3
SCARB1-210ENST00000545493 NHLH1Q02575 133 aa23.15■■□□□ 1.3
SCARB1-210ENST00000545493 CYP26C1Q6V0L0 522 aa23.15■■□□□ 1.3
SCARB1-210ENST00000545493 UROC1Q96N76 676 aa23.15■■□□□ 1.3
SCARB1-210ENST00000545493 TOPORSQ9NS56 1045 aaPredicted RBP23.15■■□□□ 1.3
SCARB1-210ENST00000545493 BLOC1S4Q9NUP1 217 aa23.15■■□□□ 1.3
SCARB1-210ENST00000545493 ANKFY1Q9P2R3 1169 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms