RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PDGFBP01127 241 aaPredicted RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 ITGB1P05556 798 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 SKIP12755 728 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 CASP5P51878 434 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 KNOP1Q1ED39 458 aaKnown RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 SYCP3Q8IZU3 236 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 MLKLQ8NB16 471 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 PPP2R3CQ969Q6 453 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 ZNF689Q96CS4 500 aaPredicted RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 BICD1Q96G01 975 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 ACO2Q99798 780 aaKnown RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 ADPGKQ9BRR6 497 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 PLVAPQ9BX97 442 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 PIN4Q9Y237 131 aaKnown RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 BIN1O00499 593 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 PSMA7O14818 248 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 PRPF6O94906 941 aaKnown RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 FGFR4P22455 802 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 HOXA11P31270 313 aaPredicted RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 LIG4P49917 911 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 NLRP12P59046 1061 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 RBM10P98175 930 aaKnown RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 ATF7IP2Q5U623 682 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 SLC27A1Q6PCB7 646 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 LINC01599Q8WXQ3 324 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 DHTKD1Q96HY7 919 aaPredicted RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 PHF7Q9BWX1 381 aaPredicted RBP12.94□□□□□ -0.34
LTBR-214ENST00000545445 FGFBP2Q9BYJ0 223 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 GDAQ9Y2T3 454 aa12.94□□□□□ -0.34
LTBR-214ENST00000545445 PDXKO00764 312 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 ENPP3O14638 875 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 KIAA0391O15091 583 aaKnown RBP12.93□□□□□ -0.34
LTBR-214ENST00000545445 CLDN3O15551 220 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 B4GALT5O43286 388 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 DGKIO75912 1065 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 PROZP22891 400 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 PRCPP42785 496 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 RAB27AP51159 221 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 DSC3Q14574 896 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 KYAT1Q16773 422 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 DCAF4L1Q3SXM0 396 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 TWF2Q6IBS0 349 aaKnown RBP12.93□□□□□ -0.34
LTBR-214ENST00000545445 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 GLIS3Q8NEA6 775 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 SPPL3Q8TCT6 385 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 TMEM174Q8WUU8 243 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 P2RX5Q93086 422 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
LTBR-214ENST00000545445 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 TYW1Q9NV66 732 aaKnown RBP12.93□□□□□ -0.34
LTBR-214ENST00000545445 ANO10Q9NW15 660 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 STYXL1Q9Y6J8 313 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
LTBR-214ENST00000545445 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
LTBR-214ENST00000545445 ZNF623O75123 536 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 MCF2P10911 925 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 BMP6P22004 513 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 GARTP22102 1010 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 SP100P23497 879 aaPredicted RBP12.92□□□□□ -0.34
LTBR-214ENST00000545445 MCL1Q07820 350 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 KCNA1Q09470 495 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 MYBPC2Q14324 1141 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 STX1AQ16623 288 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 SLC24A5Q71RS6 500 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
LTBR-214ENST00000545445 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms