RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TSSK4Q6SA08 328 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 TPRG1Q6ZUI0 275 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 KRT25Q7Z3Z0 450 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 NETO1Q8TDF5 533 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 KXD1Q9BQD3 176 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 PLA2G2FQ9BZM2 168 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 TRPV5Q9NQA5 729 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 MRPS17Q9Y2R5 130 aaKnown RBP16.36■□□□□ 0.21
RTN3-214ENST00000545432 CHD6Q8TD26 2715 aa16.36■□□□□ 0.21
RTN3-214ENST00000545432 TDRD15B5MCY1 1934 aaKnown RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 PTGESO14684 152 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 CCL16O15467 120 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 B4GALT5O43286 388 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 RETP07949 1114 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 FGFR3P22607 806 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 GLRA2P23416 452 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 INF2Q27J81 1249 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 XKR9Q5GH70 373 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 FAM171A1Q5VUB5 890 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 LAIR1Q6GTX8 287 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 BLOC1S2Q6QNY1 142 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 ELSPBP1Q96BH3 223 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 HSD17B14Q9BPX1 270 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 HCFC1R1Q9NWW0 138 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 MTRRQ9UBK8 725 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 GMEB2Q9UKD1 530 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 SNX14Q9Y5W7 946 aa16.35■□□□□ 0.21
RTN3-214ENST00000545432 CNOT1A5YKK6 2376 aaKnown RBP16.35■□□□□ 0.21
RTN3-214ENST00000545432 TMEM189-UBE2V1I3L0A0 370 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 DGAT1O75907 488 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 MICAL2O94851 1124 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 KIF4AO95239 1232 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 DEXIO95424 95 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 HSPA4P34932 840 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
RTN3-214ENST00000545432 SLC7A14Q8TBB6 771 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 PRIMPOLQ96LW4 560 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 FZD8Q9H461 694 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 NCOA5Q9HCD5 579 aaKnown RBP16.34■□□□□ 0.21
RTN3-214ENST00000545432 HEBP1Q9NRV9 189 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
RTN3-214ENST00000545432 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 KLK14Q9P0G3 267 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 USP18Q9UMW8 372 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 BACE2Q9Y5Z0 518 aa16.34■□□□□ 0.21
RTN3-214ENST00000545432 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 MAN2B1O00754 1011 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 NPTXRO95502 500 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 FCARP24071 287 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 OR1D2P34982 312 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
RTN3-214ENST00000545432 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.2
RTN3-214ENST00000545432 SLC5A9Q2M3M2 681 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 TANGO2Q6ICL3 276 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 JAKMIP1Q96N16 626 aaKnown RBP16.33■□□□□ 0.2
RTN3-214ENST00000545432 CFAP47Q6ZTR5 3102 aa16.33■□□□□ 0.2
RTN3-214ENST00000545432 THP07101 528 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 RHOP08100 348 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 MLLT6P55198 1093 aaPredicted RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 CTTNQ14247 550 aaKnown RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 PPM1JQ5JR12 505 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 NEK8Q86SG6 692 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 CEP57Q86XR8 500 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 POLIQ9UNA4 740 aa16.32■□□□□ 0.2
RTN3-214ENST00000545432 MRPS23Q9Y3D9 190 aaKnown RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.32■□□□□ 0.2
RTN3-214ENST00000545432 ABLIM3O94929 683 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 PAPSS2O95340 614 aaPredicted RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
RTN3-214ENST00000545432 SPEM2Q0P670 501 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 CSRP2Q16527 193 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 CDCA2Q69YH5 1023 aaPredicted RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
RTN3-214ENST00000545432 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms