RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CLPTM1LQ96KA5 538 aa7.21□□□□□ -1.26
COPA-206ENST00000545266 SLC23A1Q9UHI7 598 aa7.21□□□□□ -1.26
COPA-206ENST00000545266 POLHQ9Y253 713 aa7.21□□□□□ -1.26
COPA-206ENST00000545266 ALDH1A3P47895 512 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 CTSWP56202 376 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 PTH1RQ03431 593 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 C1QL3Q5VWW1 255 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 AFMIDQ63HM1 303 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 GRAMD1CQ8IYS0 662 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 ANKRD35Q8N283 1001 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 D2HGDHQ8N465 521 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 C3orf20Q8ND61 904 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 SLC35B2Q8TB61 432 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 STON2Q8WXE9 905 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 ST8SIA2Q92186 375 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 MIEF2Q96C03 454 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 FAM193BQ96PV7 902 aaPredicted RBP7.2□□□□□ -1.26
COPA-206ENST00000545266 ACO2Q99798 780 aaKnown RBP7.2□□□□□ -1.26
COPA-206ENST00000545266 BDH2Q9BUT1 245 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 C1orf112Q9NSG2 853 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 CLCA2Q9UQC9 943 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 ACTL7AQ9Y615 435 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 PNPLA7Q6ZV29 1317 aa7.2□□□□□ -1.26
COPA-206ENST00000545266 NT5C1B-RDH14C9J2C7 533 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 KIF3BO15066 747 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 IPO13O94829 963 aaKnown RBP7.19□□□□□ -1.26
COPA-206ENST00000545266 ARIH2O95376 493 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 ALDH2P05091 517 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 SNRPA1P09661 255 aaKnown RBP7.19□□□□□ -1.26
COPA-206ENST00000545266 SYN1P17600 705 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 MAP2K6P52564 334 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 RABGGTBP53611 331 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 ELAVL1Q15717 326 aaKnown RBP7.19□□□□□ -1.26
COPA-206ENST00000545266 HSP90AB2PQ58FF8 381 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 DCAF17Q5H9S7 520 aaPredicted RBP7.19□□□□□ -1.26
COPA-206ENST00000545266 ANKS6Q68DC2 871 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 DENND1CQ8IV53 801 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 DCBLD1Q8N8Z6 715 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 TMX3Q96JJ7 454 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 CPEB1Q9BZB8 566 aaKnown RBP7.19□□□□□ -1.26
COPA-206ENST00000545266 KMT5AQ9NQR1 393 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 OBP2AQ9NY56 170 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 GABBR1Q9UBS5 961 aa7.19□□□□□ -1.26
COPA-206ENST00000545266 MFAP3LO75121 409 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 TUSC2O75896 110 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 GNAT2P19087 354 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 MALP21145 153 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 CLRN1P58418 232 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 NOGQ13253 232 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 R3HDM1Q15032 1099 aaKnown RBP7.18□□□□□ -1.26
COPA-206ENST00000545266 ERICH6BQ5W0A0 696 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 CHST15Q7LFX5 561 aaPredicted RBP7.18□□□□□ -1.26
COPA-206ENST00000545266 RSPH3Q86UC2 560 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 WDR75Q8IWA0 830 aaKnown RBP7.18□□□□□ -1.26
COPA-206ENST00000545266 RGMAQ96B86 450 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 FAM167AQ96KS9 214 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 LRFN3Q9BTN0 628 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 MRI1Q9BV20 369 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 TMEM60Q9H2L4 133 aa7.18□□□□□ -1.26
COPA-206ENST00000545266 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 VSTM5A8MXK1 200 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 K7ESM1 405 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 FOXD2O60548 495 aaPredicted RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 HRGP04196 525 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 ATF3P18847 181 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 ACO1P21399 889 aaKnown RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 AGFG1P52594 562 aaKnown RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 ZNF280AP59817 542 aaPredicted RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 NKX6-1P78426 367 aaPredicted RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 HHEXQ03014 270 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 SNAPC2Q13487 334 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 HLTFQ14527 1009 aaKnown RBP eCLIP7.17□□□□□ -1.26
COPA-206ENST00000545266 KHDC1Q4VXA5 237 aaKnown RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 OVCH2Q7RTZ1 564 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 DGKHQ86XP1 1220 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 ELOA2Q8IYF1 753 aaPredicted RBP7.17□□□□□ -1.26
COPA-206ENST00000545266 FAM43AQ8N2R8 423 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 ZBTB34Q8NCN2 500 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 IL17RDQ8NFM7 739 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 FBXO18Q8NFZ0 1043 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 CGRRF1Q99675 332 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 NDC1Q9BTX1 674 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 C1QTNF3Q9BXJ4 246 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 MAN1C1Q9NR34 630 aa7.17□□□□□ -1.26
COPA-206ENST00000545266 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
COPA-206ENST00000545266 LRRC14BA6NHZ5 514 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 B3GALT2O43825 422 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 UBXN7O94888 489 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 ATP5JP18859 108 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 PLP2Q04941 152 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 EFEMP1Q12805 493 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 VPS72Q15906 364 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 HS1BP3Q53T59 392 aa7.16□□□□□ -1.26
COPA-206ENST00000545266 XYLT1Q86Y38 959 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms