RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 DMP1Q13316 513 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 BMS1Q14692 1282 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PTPAQ15257 358 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 FAM187BQ17R55 369 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 LONRF3Q496Y0 759 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 NOMO2Q5JPE7 1267 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CLLU1OSQ5K130 101 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 UBXN11Q5T124 520 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CDCA2Q69YH5 1023 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 FAM173BQ6P4H8 233 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 SLC27A1Q6PCB7 646 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 KCNT2Q6UVM3 1135 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 LRRC55Q6ZSA7 311 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 C1orf186Q6ZWK4 172 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 KCNK18Q7Z418 384 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 SPPL3Q8TCT6 385 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 MICAL1Q8TDZ2 1067 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 POF1BQ8WVV4 589 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 LPPQ93052 612 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PNMA5Q96PV4 448 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 FAM193BQ96PV7 902 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PLIN2Q99541 437 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ADPGKQ9BRR6 497 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CCSER1Q9C0I3 900 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 FZD8Q9H461 694 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 RSAD1Q9HA92 442 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ETNK1Q9HBU6 452 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CCDC39Q9UFE4 941 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 IPPQ9Y573 584 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 SRPRBQ9Y5M8 271 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PLXNA4Q9HCM2 1894 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 TDRD15B5MCY1 1934 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 A0A1B0GUA9 196 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 J3QL48 77 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 ACKR2O00590 384 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 N4BP3O15049 544 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 GDF9O60383 454 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 HIP1RO75146 1068 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 PRKCBP05771 671 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 LIG1P18858 919 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 MARCKSP29966 332 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 PRPF4BQ13523 1007 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 SLC39A14Q15043 492 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 STK38Q15208 465 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 TMEM119Q4V9L6 283 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 TCEAL5Q5H9L2 206 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 AGMOQ6ZNB7 445 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 BSNDQ8WZ55 320 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 MRPS27Q92552 414 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 TMEM169Q96HH4 297 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 USP28Q96RU2 1077 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 RUSC1Q9BVN2 902 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 EIF2AQ9BY44 585 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 POLD4Q9HCU8 107 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 KMT5AQ9NQR1 393 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 TBC1D13Q9NVG8 400 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 SPG21Q9NZD8 308 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 LZTS1Q9Y250 596 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 GIT1Q9Y2X7 761 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 MORC2Q9Y6X9 1032 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-224ENST00000544990 CDH23Q9H251 3354 aa8.11□□□□□ -1.11
CPSF7-224ENST00000544990 CHD9Q3L8U1 2897 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 FSD2A1L4K1 749 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 MEIS3P2A8K0S8 358 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 H0YCG3 227 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 B4GALT5O43286 388 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ZC3H11AO75152 810 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 CSPG5O95196 566 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 NPTXRO95502 500 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ALDH2P05091 517 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 KRT18P05783 430 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 PLCG1P19174 1290 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 WEE1P30291 646 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 DDIT3P35638 169 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 NPTX2P47972 431 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 NASPP49321 788 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 SLC12A3P55017 1021 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 BCAR1P56945 870 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 GRIN1Q05586 938 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ATL3Q6DD88 541 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 TAS1R3Q7RTX0 852 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 GPBP1Q86WP2 473 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 CDR2LQ86X02 465 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms