RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 EIF2AK2P19525 551 aaKnown RBP13.95□□□□□ -0.18
CPSF7-223ENST00000544669 AP3M2P53677 418 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 CLDN10P78369 228 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 ACTN3Q08043 901 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-223ENST00000544669 STRN3Q13033 797 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 ZDHHC24Q6UX98 284 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 SLC30A10Q6XR72 485 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 CBWD2Q8IUF1 395 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 OR2W6PQ8NHA6 318 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-223ENST00000544669 RAPGEF5Q92565 580 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 SERPINB12Q96P63 405 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 KDM4CQ9H3R0 1056 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
CPSF7-223ENST00000544669 PKD2L1Q9P0L9 805 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 SCINQ9Y6U3 715 aa13.95□□□□□ -0.18
CPSF7-223ENST00000544669 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
CPSF7-223ENST00000544669 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 TMEM110-MUSTN1A8MSY1 372 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 MMEP08473 750 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 PYGMP11217 842 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 TBXAS1P24557 533 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SEC24CP53992 1094 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ITIH4Q14624 930 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SGO2Q562F6 1265 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ICE2Q659A1 982 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SLC47A2Q86VL8 602 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 TATDN2Q93075 761 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 PPME1Q9Y570 386 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 CAPN7Q9Y6W3 813 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 WNT10BO00744 389 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 HNRNPDLO14979 420 aaKnown RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 PSTPIP1O43586 416 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ADRB2P07550 413 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 ADSSP30520 456 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 RPL21P46778 160 aaKnown RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 IFT88Q13099 833 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 PSMD6Q15008 389 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 XKR3Q5GH77 459 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 CIAPIN1Q6FI81 312 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 CCDC197Q8NCU1 140 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 KRT35Q92764 455 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 BICD1Q96G01 975 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SNF8Q96H20 258 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SEC16BQ96JE7 1060 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 MYOZ2Q9NPC6 264 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 SAMD15Q9P1V8 674 aa13.94□□□□□ -0.18
CPSF7-223ENST00000544669 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
CPSF7-223ENST00000544669 C19orf81C9J6K1 198 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 RIPK2O43353 540 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 TCEA3O75764 348 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 NR3C2P08235 984 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 KRT5P13647 590 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 CCDC89Q8N998 374 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 PLEKHO2Q8TD55 490 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 DDX1Q92499 740 aaKnown RBP13.93□□□□□ -0.18
CPSF7-223ENST00000544669 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
CPSF7-223ENST00000544669 TRAIPQ9BWF2 469 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 INTS9Q9NV88 658 aaKnown RBP13.93□□□□□ -0.18
CPSF7-223ENST00000544669 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
CPSF7-223ENST00000544669 GOLGA8IPA6NC78 632 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 GOLGA8JA6NMD2 632 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 ANKRD63C9JTQ0 380 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 VWA5AO00534 786 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 ATP2A1O14983 1001 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 CAND2O75155 1236 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 RARAP10276 462 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 UNGP13051 313 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-223ENST00000544669 LIG4P49917 911 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 PTK6Q13882 451 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 SWT1Q5T5J6 900 aaKnown RBP13.92□□□□□ -0.18
CPSF7-223ENST00000544669 ANO5Q75V66 913 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
CPSF7-223ENST00000544669 RHOT1Q8IXI2 618 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 MCOLN2Q8IZK6 566 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
CPSF7-223ENST00000544669 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 PPCSQ9HAB8 311 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 ANAPC7Q9UJX3 599 aa13.92□□□□□ -0.18
CPSF7-223ENST00000544669 CCNE2O96020 404 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms