RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	SCNN1G	P51170	649 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	DSC2	Q02487	901 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	CDSN	Q15517	529 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	BMT2	Q1RMZ1	405 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	IFIT1B	Q5T764	474 aa	Known RBP	6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	FAM102B	Q5T8I3	360 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	DRC7	Q8IY82	874 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	GSPT2	Q8IYD1	628 aa	Known RBP	6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	IFI44	Q8TCB0	444 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	PGBD4	Q96DM1	585 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	CLPTM1L	Q96KA5	538 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	MRGPRX4	Q96LA9	322 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	LRGUK	Q96M69	825 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	AIFM3	Q96NN9	605 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	MRI1	Q9BV20	369 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	C1QTNF3	Q9BXJ4	246 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	SLC12A5	Q9H2X9	1139 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	KLRG2	A4D1S0	409 aa	Predicted RBP	6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506		B8ZZF3	427 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	TEX33	O43247	280 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	OFD1	O75665	1012 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	SNRPA1	P09661	255 aa	Known RBP	6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	ATP5J	P18859	108 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	ACRV1	P26436	265 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	MAN2A2	P49641	1150 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	CLRN1	P58418	232 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	RAP2B	P61225	183 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	CRHR2	Q13324	411 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	ZNF267	Q14586	743 aa	Predicted RBP	6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	METTL24	Q5JXM2	366 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	OTUD7B	Q6GQQ9	843 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	HTR3D	Q70Z44	454 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	TTC7B	Q86TV6	843 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	PLXDC1	Q8IUK5	500 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	DCBLD1	Q8N8Z6	715 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	RNF169	Q8NCN4	708 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	TFAP2C	Q92754	450 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	TSR2	Q969E8	191 aa	Known RBP	6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	HPS3	Q969F9	1004 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	MVB12A	Q96EY5	273 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	DMRTA2	Q96SC8	542 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	MYOC	Q99972	504 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	GPR87	Q9BY21	358 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	SPON1	Q9HCB6	807 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	NMRK2	Q9NPI5	230 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	SLC23A1	Q9UHI7	598 aa		6.83	□□□□□ -1.32
LEMD3-205	ENST00000544506	KRTAP23-1	A1A580	65 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	RPLP2	P05387	115 aa	Known RBP	6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	LPO	P22079	712 aa	Predicted RBP	6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	CTXN1	P60606	82 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	RRP1B	Q14684	758 aa	Known RBP	6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	RAB39A	Q14964	217 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	VPS72	Q15906	364 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	PGS1	Q32NB8	556 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	SPDYA	Q5MJ70	313 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	ATAT1	Q5SQI0	421 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	CXorf57	Q6NSI4	855 aa	Known RBP	6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	SEM1	Q6ZVN7	128 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	TCEAL8	Q8IYN2	117 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	MAP3K14	Q99558	947 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	MNT	Q99583	582 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	ANLN	Q9NQW6	1124 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	CLCA2	Q9UQC9	943 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	TSC22D4	Q9Y3Q8	395 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	TESMIN	Q9Y4I5	508 aa		6.82	□□□□□ -1.32
LEMD3-205	ENST00000544506	PNPLA7	Q6ZV29	1317 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	LRRC14B	A6NHZ5	514 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	AP1G1	O43747	822 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	PARN	O95453	639 aa	Known RBP	6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	HSPA6	P17066	643 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	ZNF280A	P59817	542 aa	Predicted RBP	6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	TLE1	Q04724	770 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	GTF2H3	Q13889	308 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	CNGB1	Q14028	1251 aa	Predicted RBP	6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	NAIF1	Q69YI7	327 aa	Predicted RBP	6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	NXN	Q6DKJ4	435 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	EFCAB12	Q6NXP0	572 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	ZNF529	Q6P280	563 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	GADL1	Q6ZQY3	521 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	FMNL3	Q8IVF7	1028 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	GRAMD1C	Q8IYS0	662 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	OR10H5	Q8NGA6	315 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	ZFP28	Q8NHY6	868 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	RGMA	Q96B86	450 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	CLIP3	Q96DZ5	547 aa		6.81	□□□□□ -1.32
LEMD3-205	ENST00000544506	GOLGA6L6	A8MZA4	724 aa		6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	MLC1	Q15049	377 aa		6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	KHDC1	Q4VXA5	237 aa	Known RBP	6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	B3GNT9	Q6UX72	402 aa		6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	MYO1H	Q8N1T3	1032 aa		6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	MAGEB6	Q8N7X4	407 aa		6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	DIS3L	Q8TF46	1054 aa	Known RBP	6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	VRK1	Q99986	396 aa	Predicted RBP	6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.8	□□□□□ -1.32
LEMD3-205	ENST00000544506	CALCOCO1	Q9P1Z2	691 aa		6.8	□□□□□ -1.32

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