RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SH3GL3Q99963 347 aa16.11■□□□□ 0.17
CHFR-223ENST00000544268 SPATS2LQ9NUQ6 558 aaKnown RBP16.11■□□□□ 0.17
CHFR-223ENST00000544268 NFASCO94856 1347 aa16.11■□□□□ 0.17
CHFR-223ENST00000544268 ZNFX1Q9P2E3 1918 aaKnown RBP16.11■□□□□ 0.17
CHFR-223ENST00000544268 GOLGA8IPA6NC78 632 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 K7ENM7 598 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 EIF3DO15371 548 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHFR-223ENST00000544268 EXOC3O60645 756 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 ICAM3P32942 547 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 ZNF131P52739 623 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 SOX10P56693 466 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 ZNF211Q13398 564 aaPredicted RBP16.1■□□□□ 0.17
CHFR-223ENST00000544268 E2F5Q15329 346 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 PADI6Q6TGC4 694 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 CPNE8Q86YQ8 564 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 ARHGEF19Q8IW93 802 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 SENP7Q9BQF6 1050 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 KIFC3Q9BVG8 833 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 THAP2Q9H0W7 228 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 SLC9A2Q9UBY0 812 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 COG5Q9UP83 839 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 GCLMP48507 274 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 PPP3CAQ08209 521 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 HLTFQ14527 1009 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHFR-223ENST00000544268 CFAP58Q5T655 872 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 NT5DC3Q86UY8 548 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 TATDN2Q93075 761 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
CHFR-223ENST00000544268 E7EVH7 732 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 DNM1LO00429 736 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 MGRN1O60291 552 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 LYPLA2O95372 231 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 CALCAP01258 141 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 YWHABP31946 246 aaKnown RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 STAT1P42224 750 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 PSMC5P62195 406 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 XRCC4Q13426 336 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 HS2ST1Q7LGA3 356 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 RDM1Q8NG50 284 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 TRIM31Q9BZY9 425 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 HAUS2Q9NVX0 235 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 STXBP5LQ9Y2K9 1186 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 MYH11P35749 1972 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 GCKP35557 465 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 RARRES1P49788 294 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 ACTR2P61160 394 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 MYL7Q01449 175 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 GLE1Q53GS7 698 aaKnown RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 ANKRD20A8PQ5CZ79 823 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 C1QTNF12Q5T7M4 302 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 DNAJC14Q6Y2X3 702 aaPredicted RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 C4orf19Q8IY42 314 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 LMO3Q8TAP4 145 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 FRMD4BQ9Y2L6 1034 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 BZW2Q9Y6E2 419 aaKnown RBP16.09■□□□□ 0.17
CHFR-223ENST00000544268 MCM3APO60318 1980 aa16.09■□□□□ 0.17
CHFR-223ENST00000544268 KRIT1O00522 736 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 TTI1O43156 1089 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.17
CHFR-223ENST00000544268 GCLCP48506 637 aaPredicted RBP16.08■□□□□ 0.17
CHFR-223ENST00000544268 NPEPPSP55786 919 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 CCNA1P78396 465 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 BFSP1Q12934 665 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 PRPF4BQ13523 1007 aaKnown RBP16.08■□□□□ 0.17
CHFR-223ENST00000544268 LACTB2Q53H82 288 aaPredicted RBP16.08■□□□□ 0.17
CHFR-223ENST00000544268 AP1ARQ63HQ0 302 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 ATP6V1G3Q96LB4 118 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 SYT11Q9BT88 431 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 STK33Q9BYT3 514 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 GABBR1Q9UBS5 961 aa16.08■□□□□ 0.17
CHFR-223ENST00000544268 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.17
CHFR-223ENST00000544268 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 HMGB1P1B2RPK0 211 aaPredicted RBP16.08■□□□□ 0.16
CHFR-223ENST00000544268 RPSAP08865 295 aaKnown RBP16.08■□□□□ 0.16
CHFR-223ENST00000544268 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.16
CHFR-223ENST00000544268 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 SAPCD2Q86UD0 394 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 KIRREL3Q8IZU9 778 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
CHFR-223ENST00000544268 TRIM51Q9BSJ1 452 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms