RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 PLXDC1Q8IUK5 500 aa4.72□□□□□ -1.65
CCDC170-203ENST00000544131 CPEB3Q8NE35 698 aaKnown RBP4.72□□□□□ -1.65
CCDC170-203ENST00000544131 SENP6Q9GZR1 1112 aaPredicted RBP4.72□□□□□ -1.65
CCDC170-203ENST00000544131 SERHL2Q9H4I8 314 aa4.72□□□□□ -1.65
CCDC170-203ENST00000544131 CCM2LQ9NUG4 571 aaPredicted RBP4.72□□□□□ -1.65
CCDC170-203ENST00000544131 SCOCQ9UIL1 159 aa4.72□□□□□ -1.65
CCDC170-203ENST00000544131 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 PJA2O43164 708 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 B3GALT2O43825 422 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
CCDC170-203ENST00000544131 PROZP22891 400 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 SREBF1P36956 1147 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.66
CCDC170-203ENST00000544131 MCAMP43121 646 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 MALLQ13021 153 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 RESTQ13127 1097 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 RRP12Q5JTH9 1297 aaKnown RBP4.71□□□□□ -1.66
CCDC170-203ENST00000544131 RNF219Q5W0B1 726 aaPredicted RBP4.71□□□□□ -1.66
CCDC170-203ENST00000544131 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 AFMIDQ63HM1 303 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 METRNLQ641Q3 311 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 MED25Q71SY5 747 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 LCORLQ8N3X6 602 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 MRI1Q9BV20 369 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 DNM3Q9UQ16 869 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 ATP11BQ9Y2G3 1177 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 WASHC2AQ641Q2 1341 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 PNPLA7Q6ZV29 1317 aa4.71□□□□□ -1.66
CCDC170-203ENST00000544131 ATRNL1Q5VV63 1379 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 GRID2IPA4D2P6 1211 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 HLA-DOAP06340 250 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 IL2RBP14784 551 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 BMP5P22003 454 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 BMPR1AP36894 532 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 SLC5A3P53794 718 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 GUCY1B3Q02153 619 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 SP140Q13342 867 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 ANO4Q32M45 955 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 BEAN1Q3B7T3 259 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 HECTD2Q5U5R9 776 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 EGFLAMQ63HQ2 1017 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 ARHGEF19Q8IW93 802 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 CMTR2Q8IYT2 770 aaKnown RBP4.7□□□□□ -1.66
CCDC170-203ENST00000544131 PPM1NQ8N819 430 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 BEND2Q8NDZ0 799 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 NEU1Q99519 415 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 LANCL2Q9NS86 450 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 AJAP1Q9UKB5 411 aaPredicted RBP4.7□□□□□ -1.66
CCDC170-203ENST00000544131 PACSIN3Q9UKS6 424 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 PRKAB1Q9Y478 270 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 FPGT-TNNI3KV9GXZ4 949 aa4.7□□□□□ -1.66
CCDC170-203ENST00000544131 RHOBTB3O94955 611 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 POMCP01189 267 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 ATP5JP18859 108 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 POU3F3P20264 500 aaPredicted RBP4.69□□□□□ -1.66
CCDC170-203ENST00000544131 FPR1P21462 350 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 LMO1P25800 156 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 DDX6P26196 483 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC170-203ENST00000544131 MTNR1BP49286 362 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 USP14P54578 494 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 ERVK-21P61565 698 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 TP53BP2Q13625 1128 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 SEPT2Q15019 361 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 CLUL1Q15846 466 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 SUPT20HQ8NEM7 779 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 DPF2Q92785 391 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 HOXB13Q92826 284 aaPredicted RBP4.69□□□□□ -1.66
CCDC170-203ENST00000544131 MOCS1Q9NZB8 636 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 DKK2Q9UBU2 259 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 GPR45Q9Y5Y3 372 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 ACTL7AQ9Y615 435 aa4.69□□□□□ -1.66
CCDC170-203ENST00000544131 POLR2AP24928 1970 aaKnown RBP4.69□□□□□ -1.66
CCDC170-203ENST00000544131 PHLDB1Q86UU1 1377 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 ENDOD1O94919 500 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 NUDT3O95989 172 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 IL12RB1P42701 662 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 ALDH1A3P47895 512 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 MXRA7P84157 204 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 KLF1Q13351 362 aaPredicted RBP4.68□□□□□ -1.66
CCDC170-203ENST00000544131 UBXN2BQ14CS0 331 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 GJC2Q5T442 439 aaPredicted RBP4.68□□□□□ -1.66
CCDC170-203ENST00000544131 AGAP9Q5VTM2 703 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 ZNF529Q6P280 563 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 Q6YL49 198 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 UBE3BQ7Z3V4 1068 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 DDX42Q86XP3 938 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC170-203ENST00000544131 MAPKAPK5Q8IW41 473 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 OR2I1PQ8NGU4 316 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 CCHCR1Q8TD31 782 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 ADAM2Q99965 735 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 MYOCQ99972 504 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 ZSWIM1Q9BR11 485 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 REXO4Q9GZR2 422 aaKnown RBP4.68□□□□□ -1.66
CCDC170-203ENST00000544131 TMEM140Q9NV12 185 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 KLHL11Q9NVR0 708 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 SLC5A4Q9NY91 659 aa4.68□□□□□ -1.66
CCDC170-203ENST00000544131 RNF181Q9P0P0 153 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms