RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MRPS25P82663 173 aaKnown RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 FMO1Q01740 532 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 LAMTOR4Q0VGL1 99 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 TDRD10Q5VZ19 366 aaKnown RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ELMO3Q96BJ8 720 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 FAM84AQ96KN4 292 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 KRT12Q99456 494 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 CGRRF1Q99675 332 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ACP6Q9NPH0 428 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 UNCXA6NJT0 531 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 PDHXO00330 501 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 WNT7BP56706 349 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 CDCA2Q69YH5 1023 aaPredicted RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ARMCX2Q7L311 632 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 LRRC71Q8N4P6 559 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 C2orf40Q9H1Z8 148 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 PDGFCQ9NRA1 345 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 COG5Q9UP83 839 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 NOC2LQ9Y3T9 749 aaKnown RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 ZBTB42B2RXF5 422 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 MYBL2P10244 700 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 TCEAL1Q15170 157 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 TERF2Q15554 542 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 RNF149Q8NC42 400 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 TCHPQ9BT92 498 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 CCDC113Q9H0I3 377 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 VIPAS39Q9H9C1 493 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 PTPRJQ12913 1337 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 POLR3GO15318 223 aaPredicted RBP18.34■□□□□ 0.53
PTPRO-209ENST00000543886 CLSTN1O94985 981 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 ZBTB48P10074 688 aaPredicted RBP18.34■□□□□ 0.53
PTPRO-209ENST00000543886 GTF2A2P52657 109 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 MKRN4PQ13434 485 aaPredicted RBP18.34■□□□□ 0.53
PTPRO-209ENST00000543886 MAPK6Q16659 721 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 IFT20Q8IY31 132 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
PTPRO-209ENST00000543886 SLC45A1Q9Y2W3 748 aa18.34■□□□□ 0.53
PTPRO-209ENST00000543886 PLXNB2O15031 1838 aa18.33■□□□□ 0.53
PTPRO-209ENST00000543886 IGKV6-21A0A0C4DH24 114 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 HBP1O60381 514 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 MSCO60682 206 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 TOM1L1O75674 476 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 PRKCBP05771 671 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 TNFRSF8P28908 595 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 TFDP1Q14186 410 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 MAP1SQ66K74 1059 aaPredicted RBP18.33■□□□□ 0.52
PTPRO-209ENST00000543886 KLHL7Q8IXQ5 586 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 RASGEF1CQ8N431 466 aa18.33■□□□□ 0.52
PTPRO-209ENST00000543886 AENQ8WTP8 325 aaKnown RBP18.33■□□□□ 0.52
PTPRO-209ENST00000543886 CNTNAP2Q9UHC6 1331 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 CCL15-CCL14A0A0B4J2E2 113 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 PHACTR2O75167 634 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
PTPRO-209ENST00000543886 MKRN3Q13064 507 aaKnown RBP18.32■□□□□ 0.52
PTPRO-209ENST00000543886 CCL15Q16663 113 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 ZBTB33Q86T24 672 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 RHPN2Q8IUC4 686 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 PLXNA1Q9UIW2 1896 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 VNN1O95497 513 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 ADORA2AP29274 412 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 BPIFB4P59827 614 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF792Q3KQV3 632 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 BRSK2Q8IWQ3 736 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 TRAPPC12Q8WVT3 735 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 DDX1Q92499 740 aaKnown RBP18.32■□□□□ 0.52
PTPRO-209ENST00000543886 ZNF653Q96CK0 615 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 GDAP1L1Q96MZ0 367 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 ERAP1Q9NZ08 941 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
PTPRO-209ENST00000543886 TTLL13PA6NNM8 815 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 BTBD19C9JJ37 291 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 H3BQF6 201 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 CCDC188H7C350 402 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 KRIT1O00522 736 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 DDX3YO15523 660 aaKnown RBP18.31■□□□□ 0.52
PTPRO-209ENST00000543886 EPHB4P54760 987 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 LAMC2Q13753 1193 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
PTPRO-209ENST00000543886 AP1M1Q9BXS5 423 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 VTA1Q9NP79 307 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 HPCAL4Q9UM19 191 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 PCDHB2Q9Y5E7 798 aa18.31■□□□□ 0.52
PTPRO-209ENST00000543886 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
PTPRO-209ENST00000543886 MTA2O94776 668 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GLI1P08151 1106 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 POTEJP0CG39 1038 aa18.3■□□□□ 0.52
PTPRO-209ENST00000543886 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms