RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 PSMD6Q15008 389 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 PSPC1Q8WXF1 523 aaKnown RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 ZNF653Q96CK0 615 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 FAM84AQ96KN4 292 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 TRPC6Q9Y210 931 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 IGKV6D-21A0A0A0MT36 114 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 KIAA0391O15091 583 aaKnown RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 KRT5P13647 590 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 SCP2P22307 547 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 ARL2P36404 184 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 NAMPTP43490 491 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 MARCKSL1P49006 195 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 GRM1Q13255 1194 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 ADAT2Q7Z6V5 191 aaKnown RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 RIOX2Q8IUF8 465 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 ZNF564Q8TBZ8 553 aaPredicted RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 FAM81BQ96LP2 452 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 NUP85Q9BW27 656 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 C1orf112Q9NSG2 853 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 FBXO40Q9UH90 709 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 UTP11Q9Y3A2 253 aaKnown RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 PIGRP01833 764 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 UBA1P22314 1058 aaKnown RBP14.93□□□□□ -0.02
MSH2-206ENST00000543555 LRRC31Q6UY01 552 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 DEPTORQ8TB45 409 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 SLC7A3Q8WY07 619 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 LRRC45Q96CN5 670 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 FNBP1Q96RU3 617 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 NIFKQ9BYG3 293 aaKnown RBP14.93□□□□□ -0.02
MSH2-206ENST00000543555 WNT8AQ9H1J5 351 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 LRRIQ4A6NIV6 560 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 IRF6O14896 467 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 PEX5P50542 639 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 NLRP11P59045 1033 aaKnown RBP14.93□□□□□ -0.02
MSH2-206ENST00000543555 ZACNQ401N2 412 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 LMBRD2Q68DH5 695 aaPredicted RBP14.93□□□□□ -0.02
MSH2-206ENST00000543555 ACAD10Q6JQN1 1059 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 AADACL2Q6P093 401 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 CD101Q93033 1021 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 FAM114A2Q9NRY5 505 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 UVRAGQ9P2Y5 699 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 A0A0G2JMZ2 1700 aa14.93□□□□□ -0.02
MSH2-206ENST00000543555 CELF2O95319 508 aaKnown RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 IVLP07476 585 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 COPB2P35606 906 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 ACOT2P49753 483 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 WNT7BP56706 349 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 DR1Q01658 176 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 KCTD19Q17RG1 926 aaPredicted RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 TRIM51Q9BSJ1 452 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 HAPLN2Q9GZV7 340 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 RAB17Q9H0T7 212 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 PLAAQ9Y263 795 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 MYH9P35579 1960 aaKnown RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 GSTTP1A0A1W2PQM5 241 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 K7ERI5 159 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 C4BPAP04003 597 aaKnown RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 HSPA6P17066 643 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 TNNI1P19237 187 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 EDNRBP24530 442 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 HSD17B3P37058 310 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 PCYT2Q99447 389 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 DPH5Q9H2P9 285 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 CSADQ9Y600 493 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 SOWAHBA6NEL2 793 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 NF2P35240 595 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 TDRD10Q5VZ19 366 aaKnown RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 SLFN12LQ6IEE8 588 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 CRELD2Q6UXH1 353 aaPredicted RBP14.92□□□□□ -0.02
MSH2-206ENST00000543555 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 PKNOX2Q96KN3 472 aa14.92□□□□□ -0.02
MSH2-206ENST00000543555 HLA-DRAP01903 254 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 CTNNA1P35221 906 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 RFC5P40937 340 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 DHX34Q14147 1143 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 UAP1Q16222 522 aaPredicted RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 WDR44Q5JSH3 913 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 SEL1L2Q5TEA6 688 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 LRIG3Q6UXM1 1119 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 C1orf131Q8NDD1 294 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 ZC3H15Q8WU90 426 aaKnown RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 ZBTB45Q96K62 511 aaPredicted RBP14.91□□□□□ -0.02
MSH2-206ENST00000543555 SPATC1LQ9H0A9 340 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 PTPRJQ12913 1337 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 FAM187AA6NFU0 413 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 SPOPO43791 374 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 PHF2O75151 1096 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 CALCAP01258 141 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 CTNNA2P26232 953 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 FLT3P36888 993 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
MSH2-206ENST00000543555 SKOR1P84550 965 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms