RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 XKR4Q5GH76 650 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 ATAT1Q5SQI0 421 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 SLFN12LQ6IEE8 588 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 DCLRE1AQ6PJP8 1040 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 CD302Q8IX05 232 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 LINC00301Q8NCQ3 95 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 USP28Q96RU2 1077 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 RHOBTB2Q9BYZ6 727 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 S1PR5Q9H228 398 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 ST6GALNAC4Q9H4F1 302 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 PLEKHA4Q9H4M7 779 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 CHST7Q9NS84 486 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 EXOC7Q9UPT5 735 aa11.25□□□□□ -0.61
NPIPB4-217ENST00000543449 MYO7AQ13402 2215 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 BRWD1Q9NSI6 2320 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 PTGESO14684 152 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 DCXO43602 365 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 B4GALT3O60512 393 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 GLUD1P00367 558 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CLTAP09496 248 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CNPP09543 421 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 KCNE1P15382 129 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 PAX3P23760 479 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 RPL9P32969 192 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 STAT6P42226 847 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CLCN4P51793 760 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CEBPZQ03701 1054 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 GRIN1Q05586 938 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 KIAA0319Q5VV43 1072 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 SYCE2Q6PIF2 218 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 C15orf39Q6ZRI6 1047 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 STXBP4Q6ZWJ1 553 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CMASQ8NFW8 434 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 VN1R2Q8NFZ6 395 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 EPSTI1Q96J88 318 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 SNX27Q96L92 541 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TTPALQ9BTX7 342 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 VN1R3Q9BXE9 311 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 CNTN3Q9P232 1028 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 ATP6V1DQ9Y5K8 247 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 ATG2AQ2TAZ0 1938 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TRANK1O15050 2925 aa11.24□□□□□ -0.61
NPIPB4-217ENST00000543449 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 LOC730098B7Z3J9 87 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 CUTAO60888 179 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 B3GAT3O94766 335 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 F13A1P00488 732 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 EDN1P05305 212 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 GTF2BQ00403 316 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 POSTNQ15063 836 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 ALKAL1Q6UXT8 129 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 RIN2Q8WYP3 895 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 DDX12PQ92771 950 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
NPIPB4-217ENST00000543449 NPHP3-ACAD11A0A0J9YXS1 232 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 ARHGEF37A1IGU5 675 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 C2CD2LO14523 706 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 ABLIM1O14639 778 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 OGTO15294 1046 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 TEX28O15482 410 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 GPR37L1O60883 481 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 HARSP12081 509 aaKnown RBP11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 CYP3A5P20815 502 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 BECN1Q14457 450 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 NAB2Q15742 525 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 UPP1Q16831 310 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 TMEM31Q5JXX7 168 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 SPECC1Q5M775 1068 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 FAM171A1Q5VUB5 890 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 FAM173BQ6P4H8 233 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 ANKS3Q6ZW76 656 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 MAP4K3Q8IVH8 894 aa11.22□□□□□ -0.61
NPIPB4-217ENST00000543449 CUL9Q8IWT3 2517 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms