RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 VAC14Q08AM6 782 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ZNF543Q08ER8 600 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PTPAQ15257 358 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 UBE3CQ15386 1083 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SLC5A9Q2M3M2 681 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PLEKHG6Q3KR16 790 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 USP41Q3LFD5 358 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ZSCAN25Q6NSZ9 544 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PRSS55Q6UWB4 352 aaPredicted RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 STOX1Q6ZVD7 989 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PDZD4Q76G19 769 aaPredicted RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 GLRX5Q86SX6 157 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 NLRX1Q86UT6 975 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 GPIHBP1Q8IV16 184 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 KIAA0319LQ8IZA0 1049 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 DEFB119Q8N690 84 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 KRI1Q8N9T8 703 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 ZNF248Q8NDW4 579 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 RPLP0P6Q8NHW5 317 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 RHBDD1Q8TEB9 315 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 RLN3Q8WXF3 142 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SSH1Q8WYL5 1049 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SMARCD2Q92925 531 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 OSBP2Q969R2 916 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ACDQ96AP0 544 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PGBD4Q96DM1 585 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 POM121Q96HA1 1249 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 MAP7D2Q96T17 732 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 CDC6Q99741 560 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 CORO1BQ9BR76 489 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 REPIN1Q9BWE0 567 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 PUS7LQ9H0K6 701 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 RNF39Q9H2S5 420 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 GPRC5CQ9NQ84 441 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 IL17RBQ9NRM6 502 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 DNAAF2Q9NVR5 837 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 WDR70Q9NW82 654 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PAG1Q9NWQ8 432 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 FNIP2Q9P278 1114 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PILRBQ9UKJ0 227 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PCOLCE2Q9UKZ9 415 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 AKT3Q9Y243 479 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PDCD11Q14690 1871 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 MGAQ8IWI9 3026 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ATMQ13315 3056 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 MYH7P12883 1935 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 F8P00451 2351 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 PALM3A6NDB9 673 aaPredicted RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 MEIS3P2A8K0S8 358 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 GCOM1H8Y6P7 765 aaPredicted RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 BACH1O14867 736 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 KLK10O43240 276 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 BRINP1O60477 761 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 ATP9AO75110 1047 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 LUC7L3O95232 432 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 CHGBP05060 677 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 POLR2MP0CAP2 368 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 EIF4BP23588 611 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 HOXD12P35452 270 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 HSD17B4P51659 736 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 STAT5BP51692 787 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 MRPS9P82933 396 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 NBR1Q14596 966 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 SMAD1Q15797 465 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 QRICH1Q2TAL8 776 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 GPATCH4Q5T3I0 446 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 CYP4A22Q5TCH4 519 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 ZNF787Q6DD87 383 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 FUT10Q6P4F1 479 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 GIMAP6Q6P9H5 292 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 SYT13Q7L8C5 426 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 TRMT1LQ7Z2T5 733 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 TMPRSS12Q86WS5 348 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 CEP57Q86XR8 500 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 RGL4Q8IZJ4 473 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 PGBD3Q8N328 593 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 ENGASEQ8NFI3 743 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 ZSCAN18Q8TBC5 510 aaPredicted RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 E2F7Q96AV8 911 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 TCEAL4Q96EI5 215 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 ZFYVE19Q96K21 471 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 MBOAT7Q96N66 472 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 INPP4AQ96PE3 977 aaPredicted RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 STRBPQ96SI9 672 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 SENP7Q9BQF6 1050 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 TMEM47Q9BQJ4 181 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 LPIN3Q9BQK8 851 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD4-209ENST00000542717 COLEC11Q9BWP8 271 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 AMNQ9BXJ7 453 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 NACAP1Q9BZK3 213 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 API5Q9BZZ5 524 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 NAPBQ9H115 298 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 CAPN10Q9HC96 672 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 TMPRSS4Q9NRS4 437 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 FAM105AQ9NUU6 356 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 MARCH5Q9NX47 278 aa3.72□□□□□ -1.81
CHD4-209ENST00000542717 MAP3K20Q9NYL2 800 aaKnown RBP3.72□□□□□ -1.81
CHD4-209ENST00000542717 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD4-209ENST00000542717 LRRK2Q5S007 2527 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms