RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 AMHR2Q16671 573 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
PDE3A-202ENST00000542675 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 RUBCNQ92622 972 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 COLEC11Q9BWP8 271 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 PLEKHA4Q9H4M7 779 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 KCNMB3Q9NPA1 279 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 DLL3Q9NYJ7 618 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE3A-202ENST00000542675 SSX2IPQ9Y2D8 614 aa13.18□□□□□ -0.3
PDE3A-202ENST00000542675 TICRRQ7Z2Z1 1910 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 PDCD11Q14690 1871 aaKnown RBP13.17□□□□□ -0.3
PDE3A-202ENST00000542675 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 GPR37O15354 613 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 NPTXRO95502 500 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 FSHRP23945 695 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 IGFBP6P24592 240 aaPredicted RBP13.17□□□□□ -0.3
PDE3A-202ENST00000542675 RFC5P40937 340 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 EVCP57679 992 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 STARD6P59095 220 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 STK3Q13188 491 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDE3A-202ENST00000542675 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
PDE3A-202ENST00000542675 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 HDAC7Q8WUI4 952 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 CNTNAP3BQ96NU0 1288 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 MTRQ99707 1265 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 KXD1Q9BQD3 176 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
PDE3A-202ENST00000542675 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
PDE3A-202ENST00000542675 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
PDE3A-202ENST00000542675 CCL16O15467 120 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 SPIRE1Q08AE8 756 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 CAPSQ13938 189 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 EPHA7Q15375 998 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 ZC3H14Q6PJT7 736 aaKnown RBP13.16□□□□□ -0.3
PDE3A-202ENST00000542675 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 C22orf23Q9BZE7 217 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
PDE3A-202ENST00000542675 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 PARP2Q9UGN5 583 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 FBXW11Q9UKB1 542 aa13.16□□□□□ -0.3
PDE3A-202ENST00000542675 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 CASTOR2A6NHX0 329 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 ASAP2O43150 1006 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 DEXIO95424 95 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 AXLP30530 894 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
PDE3A-202ENST00000542675 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 ELMSAN1Q6PJG2 1045 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 TSSK4Q6SA08 328 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 FGF13Q92913 245 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
PDE3A-202ENST00000542675 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
PDE3A-202ENST00000542675 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.39e-7■□□□□ 11.3
PDE3A-202ENST00000542675 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 POLIQ9UNA4 740 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 ATG2BQ96BY7 2078 aa13.15□□□□□ -0.3
PDE3A-202ENST00000542675 COL4A2P08572 1712 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 CITO14578 2027 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 FAM170BA6NMN3 283 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
PDE3A-202ENST00000542675 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
PDE3A-202ENST00000542675 NR1I2O75469 434 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 TADA2AO75478 443 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 SLITRK3O94933 977 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 KIF4AO95239 1232 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 C8AP07357 584 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 GLRA2P23416 452 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
PDE3A-202ENST00000542675 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
PDE3A-202ENST00000542675 FAM171A1Q5VUB5 890 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 PIK3AP1Q6ZUJ8 805 aa13.14□□□□□ -0.31
PDE3A-202ENST00000542675 NEK8Q86SG6 692 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms