RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ACTR2P61160 394 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF211Q13398 564 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 XKR3Q5GH77 459 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 NAA35Q5VZE5 725 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ACAD10Q6JQN1 1059 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PRELID2Q8N945 189 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF653Q96CK0 615 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 NUP85Q9BW27 656 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 AVENQ9NQS1 362 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PARP2Q9UGN5 583 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 FEZ2Q9UHY8 353 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PCDHA3Q9Y5H8 950 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 STYXL1Q9Y6J8 313 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 EBAG9O00559 213 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TPD52L2O43399 206 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 GRIN3BO60391 1043 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SUPT20HL2P0C7V6 817 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 MYBL1P10243 752 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 ICAM3P32942 547 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 LSP1P33241 339 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 MDH1P40925 334 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 FNTAP49354 379 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 IRX5P78411 483 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 DHX9Q08211 1270 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SLC20A2Q08357 652 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 MESDQ14696 234 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TMEM132BQ14DG7 1078 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 PSMD6Q15008 389 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 CLEC16AQ2KHT3 1053 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SUPT20HL1Q3ZLR7 823 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 NOL9Q5SY16 702 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 CATSPERGQ6ZRH7 1159 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TAS1R3Q7RTX0 852 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SAMD7Q7Z3H4 446 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 CCDC60Q8IWA6 550 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 UBLCP1Q8WVY7 318 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 EPN3Q9H201 632 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 DPH5Q9H2P9 285 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TOPORSQ9NS56 1045 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 C1orf112Q9NSG2 853 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 CNOT7Q9UIV1 285 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 MTUS1Q9ULD2 1270 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 DOCK5Q9H7D0 1870 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 FZD9O00144 591 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SPOPO43791 374 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 CCT5P48643 541 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 ATP1A2P50993 1020 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 HMGCS2P54868 508 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 RWDD2BP57060 319 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 BPIFB4P59827 614 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 PTGISQ16647 500 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TBC1D10BQ4KMP7 808 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SWSAP1Q6NVH7 229 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 ZDHHC24Q6UX98 284 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SLC13A5Q86YT5 568 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 C3orf20Q8ND61 904 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SLCO2A1Q92959 643 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 POP1Q99575 1024 aaKnown RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 PLVAPQ9BX97 442 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 POLR3FQ9H1D9 316 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 RGS17Q9UGC6 210 aaPredicted RBP7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SLC12A6Q9UHW9 1150 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 PPP2R3BQ9Y5P8 575 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 SSC5DA1L4H1 1573 aa7.02□□□□□ -1.29
PTPRO-208ENST00000542557 TMEM110-MUSTN1A8MSY1 372 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 NDUFAB1O14561 156 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 ATMINO43313 823 aaPredicted RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 ATG7O95352 703 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 PAEPP09466 180 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 UNGP13051 313 aaPredicted RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 MAGEA9P43362 315 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 EMC2Q15006 297 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 SIX1Q15475 284 aaPredicted RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 ZACNQ401N2 412 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 SMYD5Q6GMV2 418 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 POTEAQ6S8J7 498 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 B4GALNT4Q76KP1 1039 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 CROCCP2Q86T23 111 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 HOOK3Q86VS8 718 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 PROCA1Q8NCQ7 364 aaPredicted RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 DNERQ8NFT8 737 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 OR2W6PQ8NHA6 318 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 SREK1Q8WXA9 508 aaKnown RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 MAGOHBQ96A72 148 aaKnown RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 C18orf8Q96DM3 657 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 BICD1Q96G01 975 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 RASSF4Q9H2L5 321 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 GRHL1Q9NZI5 618 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 CNOT8Q9UFF9 292 aaKnown RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 PCDHB2Q9Y5E7 798 aa7.01□□□□□ -1.29
PTPRO-208ENST00000542557 MAFBQ9Y5Q3 323 aaPredicted RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 MYH9P35579 1960 aaKnown RBP7.01□□□□□ -1.29
PTPRO-208ENST00000542557 OATP04181 439 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms