RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	RSAD2	Q8WXG1	361 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	NKD2	Q969F2	451 aa	Predicted RBP	11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	SHD	Q96IW2	340 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	CLSTN3	Q9BQT9	956 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	PAAF1	Q9BRP4	392 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	SEMA4A	Q9H3S1	761 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	DNM3	Q9UQ16	869 aa		11.72	□□□□□ -0.53
ARAP1-215	ENST00000542264	TTLL13P	A6NNM8	815 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PTGES	O14684	152 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	B3GAT3	O94766	335 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	KIF4A	O95239	1232 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	CFH	P08603	1231 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	LIG1	P18858	919 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	RAB33A	Q14088	237 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PSMD5	Q16401	504 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PPM1L	Q5SGD2	360 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	ATF7IP2	Q5U623	682 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	CWF19L1	Q69YN2	538 aa	Known RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PHLDB3	Q6NSJ2	640 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	CCDC83	Q8IWF9	413 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	BSND	Q8WZ55	320 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	DDX27	Q96GQ7	796 aa	Known RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	UROC1	Q96N76	676 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	CCDC113	Q9H0I3	377 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	BHMT2	Q9H2M3	363 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	SLC2A4RG	Q9NR83	387 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	CDH7	Q9ULB5	785 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	KIAA1024	Q9UPX6	916 aa		11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	RBM19	Q9Y4C8	960 aa	Known RBP	11.71	□□□□□ -0.53
ARAP1-215	ENST00000542264	FAM186A	A6NE01	2351 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	TMEM189-UBE2V1	I3L0A0	370 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	LAD1	O00515	517 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	NARS	O43776	548 aa	Known RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	C8A	P07357	584 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	POU2F2	P09086	479 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	FGFR3	P22607	806 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	YARS	P54577	528 aa	Known RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	ANGPT1	Q15389	498 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	NAB2	Q15742	525 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	NT5DC1	Q5TFE4	455 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	KRT79	Q5XKE5	535 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	ANKS3	Q6ZW76	656 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	MTSS1L	Q765P7	747 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	GET4	Q7L5D6	327 aa	Predicted RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	ASCL5	Q7RTU5	278 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	C4orf32	Q8N8J7	132 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	HASPIN	Q8TF76	798 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	CCDC94	Q9BW85	323 aa	Predicted RBP	11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	C17orf75	Q9HAS0	396 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	SLC38A7	Q9NVC3	462 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	FBXW11	Q9UKB1	542 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	KCNH3	Q9ULD8	1083 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	TNFSF13B	Q9Y275	285 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	GDA	Q9Y2T3	454 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	SIT1	Q9Y3P8	196 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	BACE2	Q9Y5Z0	518 aa		11.7	□□□□□ -0.54
ARAP1-215	ENST00000542264	DCHS1	Q96JQ0	3298 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	KRBA1	A5PL33	1030 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	PRR23A	A6NEV1	266 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	CCDC169	A6NNP5	214 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	U2AF2	P26368	475 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	OR1D2	P34982	312 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	FOXK2	Q01167	660 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	PTGDR	Q13258	359 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	HTR4	Q13639	388 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	EEF1DP3	Q658K8	133 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	FRMD5	Q7Z6J6	570 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	KCTD17	Q8N5Z5	321 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	GPR152	Q8TDT2	470 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	DRC1	Q96MC2	740 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	PPP1R10	Q96QC0	940 aa	Known RBP	11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	NTPCR	Q9BSD7	190 aa	Known RBP	11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	TCHP	Q9BT92	498 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	TMEM134	Q9H6X4	195 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	DDX19A	Q9NUU7	478 aa	Known RBP	11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	CACNG4	Q9UBN1	327 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	POLI	Q9UNA4	740 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	USP20	Q9Y2K6	914 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	KIF3A	Q9Y496	699 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	NUMBL	Q9Y6R0	609 aa		11.69	□□□□□ -0.54
ARAP1-215	ENST00000542264	SMIM28	A0A1B0GU29	152 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	SEC24B	O95487	1268 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	ELF1	P32519	619 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	RPL9	P32969	192 aa	Known RBP	11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	GRM5	P41594	1212 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	NPTX2	P47972	431 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	PEX3	P56589	373 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	PFKP	Q01813	784 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	ST3GAL1	Q11201	340 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	DMP1	Q13316	513 aa	Predicted RBP	11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	ECM1	Q16610	540 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	UPP1	Q16831	310 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	XKR4	Q5GH76	650 aa		11.68	□□□□□ -0.54
ARAP1-215	ENST00000542264	DTHD1	Q6ZMT9	781 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms