RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 PARM1Q6UWI2 310 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 FGF14Q92915 247 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 MTMR9Q96QG7 549 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 FOXQ1Q9C009 403 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
RTN3-211ENST00000542238 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
RTN3-211ENST00000542238 PTGESO14684 152 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 CCL16O15467 120 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 RECQL4O94761 1208 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 NTHL1P78549 312 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
RTN3-211ENST00000542238 UVSSAQ2YD98 709 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
RTN3-211ENST00000542238 KIAA2013Q8IYS2 634 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 FGF13Q92913 245 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 RPP25Q9BUL9 199 aaKnown RBP17.03■□□□□ 0.32
RTN3-211ENST00000542238 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
RTN3-211ENST00000542238 TRIP11Q15643 1979 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 KANSL1LA0AUZ9 987 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 ACKR2O00590 384 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 PRKCBP05771 671 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 LIG1P18858 919 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 OR1D2P34982 312 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 PFKPQ01813 784 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 PRKCQQ04759 706 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 PPP2R5AQ15172 486 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.32
RTN3-211ENST00000542238 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
RTN3-211ENST00000542238 NOSTRINQ8IVI9 506 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 NECAB1Q8N987 351 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 SLC7A14Q8TBB6 771 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 RUBCNQ92622 972 aa17.02■□□□□ 0.32
RTN3-211ENST00000542238 OTOGLQ3ZCN5 2332 aa17.02■□□□□ 0.31
RTN3-211ENST00000542238 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 POU2F2P09086 479 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 MCM7P33993 719 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 NAMPTP43490 491 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 FOSBP53539 338 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 ANAPC15P60006 121 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 RAB33AQ14088 237 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 NAB2Q15742 525 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
RTN3-211ENST00000542238 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 SLC44A4Q53GD3 710 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 RTL10Q7L3V2 364 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
RTN3-211ENST00000542238 ITFG1Q8TB96 612 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
RTN3-211ENST00000542238 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
RTN3-211ENST00000542238 KCNH3Q9ULD8 1083 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 DCHS1Q96JQ0 3298 aa17.01■□□□□ 0.31
RTN3-211ENST00000542238 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
RTN3-211ENST00000542238 WNT7AO00755 349 aa17■□□□□ 0.31
RTN3-211ENST00000542238 ADAM12O43184 909 aa17■□□□□ 0.31
RTN3-211ENST00000542238 LAMTOR5O43504 91 aa17■□□□□ 0.31
RTN3-211ENST00000542238 TRAPPC3O43617 180 aa17■□□□□ 0.31
RTN3-211ENST00000542238 KINO60870 393 aaKnown RBP17■□□□□ 0.31
RTN3-211ENST00000542238 MED24O75448 989 aa17■□□□□ 0.31
RTN3-211ENST00000542238 B3GAT3O94766 335 aa17■□□□□ 0.31
RTN3-211ENST00000542238 GLULP15104 373 aa17■□□□□ 0.31
RTN3-211ENST00000542238 CYP11B2P19099 503 aa17■□□□□ 0.31
RTN3-211ENST00000542238 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
RTN3-211ENST00000542238 UBXN2BQ14CS0 331 aa17■□□□□ 0.31
RTN3-211ENST00000542238 ME3Q16798 604 aa17■□□□□ 0.31
RTN3-211ENST00000542238 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
RTN3-211ENST00000542238 RSPO2Q6UXX9 243 aaPredicted RBP17■□□□□ 0.31
RTN3-211ENST00000542238 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
RTN3-211ENST00000542238 NSUN7Q8NE18 718 aaKnown RBP17■□□□□ 0.31
RTN3-211ENST00000542238 BSNDQ8WZ55 320 aa17■□□□□ 0.31
RTN3-211ENST00000542238 RMDN1Q96DB5 314 aa17■□□□□ 0.31
RTN3-211ENST00000542238 BORCS6Q96GS4 357 aa17■□□□□ 0.31
RTN3-211ENST00000542238 IFT74Q96LB3 600 aa17■□□□□ 0.31
RTN3-211ENST00000542238 OSBPL6Q9BZF3 934 aa17■□□□□ 0.31
RTN3-211ENST00000542238 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
RTN3-211ENST00000542238 MTRRQ9UBK8 725 aa17■□□□□ 0.31
RTN3-211ENST00000542238 NOTCH4Q99466 2003 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 PATJQ8NI35 1801 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 FAM170BA6NMN3 283 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 LRRN2O75325 713 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 FGFR3P22607 806 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 MAGEA9P43362 315 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 EFNA5P52803 228 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTN3-211ENST00000542238 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 UROC1Q96N76 676 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 DDX23Q9BUQ8 820 aaKnown RBP16.99■□□□□ 0.31
RTN3-211ENST00000542238 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
RTN3-211ENST00000542238 CXCL16Q9H2A7 254 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms