RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AFMP43652 599 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 NDUFA8P51970 172 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 SOX4Q06945 474 aaPredicted RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 GRIK3Q13003 919 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 CUL4BQ13620 913 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 CNNM4Q6P4Q7 775 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 MAP4K3Q8IVH8 894 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 RNF168Q8IYW5 571 aaPredicted RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 C18orf25Q96B23 403 aaPredicted RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 PABPC5Q96DU9 382 aaKnown RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 PAGE5Q96GU1 130 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 TMEM169Q96HH4 297 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 B3GALT6Q96L58 329 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 ZBP1Q9H171 429 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 TNMDQ9H2S6 317 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 TLE6Q9H808 572 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 MRPL44Q9H9J2 332 aaKnown RBP10.65□□□□□ -0.7
YBX3-212ENST00000542002 FAM13BQ9NYF5 915 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 COG5Q9UP83 839 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 RALGAPA2Q2PPJ7 1873 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 NLRC5Q86WI3 1866 aa10.65□□□□□ -0.7
YBX3-212ENST00000542002 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 H0YCG3 227 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 TBX10O75333 385 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 CTSAP10619 480 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 GAP43P17677 238 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 LIG4P49917 911 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 NUCB2P80303 420 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 SPAG1Q07617 926 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 EHHADHQ08426 723 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 COASYQ13057 564 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 NOLC1Q14978 699 aaKnown RBP eCLIP10.64□□□□□ -0.71
YBX3-212ENST00000542002 DUSP6Q16828 381 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 KIAA0319Q5VV43 1072 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 PDE12Q6L8Q7 609 aaKnown RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 CRELD2Q6UXH1 353 aaPredicted RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 EFHBQ8N7U6 833 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 FEZF2Q8TBJ5 459 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 BICD1Q96G01 975 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 SNX27Q96L92 541 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 RPS6KC1Q96S38 1066 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 SCAND2PQ9GZW5 306 aaPredicted RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 NGRNQ9NPE2 291 aaKnown RBP10.64□□□□□ -0.71
YBX3-212ENST00000542002 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 OLFML3Q9NRN5 406 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 CLDND1Q9NY35 253 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 SEL1LQ9UBV2 794 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 ATP6V1DQ9Y5K8 247 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 STYXL1Q9Y6J8 313 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 ZMYM2Q9UBW7 1377 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 MYO7AQ13402 2215 aa10.64□□□□□ -0.71
YBX3-212ENST00000542002 TTC26A0AVF1 554 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 LACTBL1A8MY62 500 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 HNRNPDLO14979 420 aaKnown RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 KLRC4O43908 158 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 KIF4AO95239 1232 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 GCNT3O95395 438 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 ADRB2P07550 413 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 CXCL8P10145 99 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 KCNE1P15382 129 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 CLCNKBP51801 687 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 TUSC3Q13454 348 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 SMC1AQ14683 1233 aaKnown RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 PTPN14Q15678 1187 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 CLUL1Q15846 466 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 ENOX2Q16206 610 aaKnown RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 UPP1Q16831 310 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 LEXMQ3ZCV2 418 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 L1TD1Q5T7N2 865 aaKnown RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 EP400NLQ6ZTU2 488 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 EPM2AIP1Q7L775 607 aaPredicted RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 HASPINQ8TF76 798 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 MSLNLQ96KJ4 702 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 NECAB3Q96P71 396 aaPredicted RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 COLEC11Q9BWP8 271 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 CHST7Q9NS84 486 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 CNTN3Q9P232 1028 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 BARX2Q9UMQ3 279 aaPredicted RBP10.63□□□□□ -0.71
YBX3-212ENST00000542002 IRAK3Q9Y616 596 aa10.63□□□□□ -0.71
YBX3-212ENST00000542002 ATG2AQ2TAZ0 1938 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.62□□□□□ -0.71
YBX3-212ENST00000542002 A0A1W2PQ27 194 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 A0A1W2PQ64 194 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 A0A1W2PQD8 194 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms