RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 LRRC14Q15048 493 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 MAPK6Q16659 721 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 SLC25A24Q6NUK1 477 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 FAM187AA6NFU0 413 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 NDUFS3O75489 264 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ALDH1A2O94788 518 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ANXA11P50995 505 aaKnown RBP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 TMC5Q6UXY8 1006 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 TRIM72Q6ZMU5 477 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 VMP1Q96GC9 406 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 NPHS2Q9NP85 383 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 S100A9P06702 114 aaKnown RBP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 OR8H2Q8N162 312 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KLHL25Q9H0H3 589 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KANSL2Q9H9L4 492 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 H7C0S8 307 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ATP6V1C1P21283 382 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 NCAPHQ15003 741 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 FAM167AQ96KS9 214 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ATP6V1G3Q96LB4 118 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KIF24Q5T7B8 1368 aa16.14■□□□□ 0.18
HMGA2-210ENST00000541363 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.18
HMGA2-210ENST00000541363 FLT3P36888 993 aa16.14■□□□□ 0.18
HMGA2-210ENST00000541363 PPP1R2P1Q96PQ5 205 aa16.14■□□□□ 0.18
HMGA2-210ENST00000541363 EPS8L2Q9H6S3 715 aa16.14■□□□□ 0.18
HMGA2-210ENST00000541363 AP4S1Q9Y587 144 aa16.14■□□□□ 0.18
HMGA2-210ENST00000541363 NDUFB5O43674 189 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RRM2P31350 389 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 MOSPD2Q8NHP6 518 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 GLMNQ92990 594 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PTPN21Q16825 1174 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RBBP8Q99708 897 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PARVAQ9NVD7 372 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 USP19O94966 1318 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 MMP1P03956 469 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 IREB2P48200 963 aaKnown RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PTH1RQ03431 593 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PWP1Q13610 501 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 SPATA21Q7Z572 469 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RNF25Q96BH1 459 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 HDHD2Q9H0R4 259 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 DNALI1O14645 258 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 CCDC137Q6PK04 289 aaKnown RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 C11orf57Q6ZUT1 292 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 SHCBP1Q8NEM2 672 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RIN3Q8TB24 985 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 CNDP1Q96KN2 507 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PCSK1NQ9UHG2 260 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RSPH10B2B2RC85 870 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 SNPHO15079 494 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 RSPH10BP0C881 870 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 GYS2P54840 703 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 TTC33Q6PID6 262 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-210ENST00000541363 PROM2Q8N271 834 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 AGGF1Q8N302 714 aaeCLIP16.14■□□□□ 0.172e-19■□□□□ 9.9
HMGA2-210ENST00000541363 HPS5Q9UPZ3 1129 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 NESP48681 1621 aa16.14■□□□□ 0.17
HMGA2-210ENST00000541363 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 STAT4Q14765 748 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 DPP10Q8N608 796 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 PAGE5Q96GU1 130 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ZMYM4Q5VZL5 1548 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ARSEP51690 589 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ARHGEF38Q9NXL2 777 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 SRGAP2O75044 1071 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 KCNK10P57789 538 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 CENPXA8MT69 81 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 SGSM1Q2NKQ1 1148 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 FBXO38Q6PIJ6 1188 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 XPO6Q96QU8 1125 aaKnown RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 SIK2Q9H0K1 926 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ANKRD65E5RJM6 399 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 MTFR1Q15390 333 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 C11orf96Q7Z7L8 435 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ABT1Q9ULW3 272 aaKnown RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 SMG5Q9UPR3 1016 aaKnown RBP16.13■□□□□ 0.17
HMGA2-210ENST00000541363 ZNF804BA4D1E1 1349 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 CLRN2A0PK11 232 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 MFAP3LO75121 409 aa16.13■□□□□ 0.17
HMGA2-210ENST00000541363 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms