RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ATP8A1Q9Y2Q0 1164 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 PCDHGC5Q9Y5F6 944 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 PCDHA2Q9Y5H9 948 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CYP3A7-CYP3A51PA0A087WV96 503 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 PGRMC1O00264 195 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 KRT13P13646 458 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CYP3A7P24462 503 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CNGA1P29973 690 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CIITAP33076 1130 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 HSD17B3P37058 310 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 NPEPPSP55786 919 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 KRT71Q3SY84 523 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 GJD2Q9UKL4 321 aa15.38■□□□□ 0.05
SFSWAP-210ENST00000541286 UNCXA6NJT0 531 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 A8MUI8 341 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 GGPS1O95749 300 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 CYP3A4P08684 503 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 GRB14Q14449 540 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 AIPL1Q9NZN9 384 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 RNF14Q9UBS8 474 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 CEP290O15078 2479 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 DIAPH2O60879 1101 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 ANP32DO95626 131 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 KCNA2P16389 499 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 DHX9Q08211 1270 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 Q4G0T1 1027 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 TRIM68Q6AZZ1 485 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 C6orf89Q6UWU4 347 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 SYCP3Q8IZU3 236 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 TRIB2Q92519 343 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 EYSQ5T1H1 3165 aa15.37■□□□□ 0.05
SFSWAP-210ENST00000541286 STAT1P42224 750 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 GALCP54803 685 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 CRYMQ14894 314 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SLFN12Q8IYM2 578 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 LMBR1Q8WVP7 490 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 RSRC1Q96IZ7 334 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 MBOAT7Q96N66 472 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SELENOSQ9BQE4 189 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 PCIF1Q9H4Z3 704 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 PFASO15067 1338 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 ATP6V1G2O95670 118 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 RPL13P26373 211 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 INHBEP58166 350 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 BEX3Q00994 111 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SWSAP1Q6NVH7 229 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF572Q7Z3I7 529 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 FAM186BQ8IYM0 893 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 PPP1R16BQ96T49 567 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 USP20Q9Y2K6 914 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 EVI5O60447 810 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SLITRK3O94933 977 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF286BP0CG31 522 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 HOXD13P35453 343 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 ELF3P78545 371 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SP3Q02447 781 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF746Q6NUN9 644 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 CCDC60Q8IWA6 550 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 WHAMMQ8TF30 809 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 TRAPPC12Q8WVT3 735 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC5A5Q92911 643 aa15.36■□□□□ 0.05
SFSWAP-210ENST00000541286 DDX3XO00571 662 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■□□□□ 8.8
SFSWAP-210ENST00000541286 RTN2O75298 545 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 CLSTN1O94985 981 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 HSPA6P17066 643 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 BYSLQ13895 437 aaKnown RBP15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 AADACL2Q6P093 401 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 SH3TC2Q8TF17 1288 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF483Q8TF39 744 aaPredicted RBP15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 GLG1Q92896 1179 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 PLXNA1Q9UIW2 1896 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 TRPV1Q8NER1 839 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 ELMO3Q96BJ8 720 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 TINF2Q9BSI4 451 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 MLXIPLQ9NP71 852 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 DNAJC12Q9UKB3 198 aa15.35■□□□□ 0.05
SFSWAP-210ENST00000541286 DRAP1Q14919 205 aaPredicted RBP15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 MORN1Q5T089 497 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 TAX1BP1Q86VP1 789 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 CTNNBL1Q8WYA6 563 aaPredicted RBP15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC35C1Q96A29 364 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 ELAC2Q9BQ52 826 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms