RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 GPR19Q15760 415 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 FAM110CQ1W6H9 321 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SLC35G1Q2M3R5 365 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 MUM1Q2TAK8 710 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PAN2Q504Q3 1202 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CT83Q5H943 113 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CWF19L1Q69YN2 538 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ESRP1Q6NXG1 681 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 JMJD6Q6NYC1 403 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 COL23A1Q86Y22 540 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 LMNTD2Q8IXW0 634 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 TSPYL6Q8N831 410 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ZNF713Q8N859 430 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 OR10H5Q8NGA6 315 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 RIN2Q8WYP3 895 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ANKS1AQ92625 1134 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ERCC4Q92889 916 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 TIGD1Q96MW7 591 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PYM1Q9BRP8 204 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CNPPD1Q9BV87 410 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PDGFDQ9GZP0 370 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CD248Q9HCU0 757 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ARGLU1Q9NWB6 273 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 OGDHLQ9ULD0 1010 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 EDARQ9UNE0 448 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SNX5Q9Y5X3 404 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 NR2E3Q9Y5X4 410 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 USP19O94966 1318 aa6.15□□□□□ -1.43
PRKDC-209ENST00000540819 A0A0G2JLL6 359 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PPC4 97 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 ISM1B1AKI9 464 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 NPC1O15118 1278 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 AHCYL1O43865 530 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 TRIM13O60858 407 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 FKTNO75072 461 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MPOP05164 745 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 EDNRBP24530 442 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 PTX3P26022 381 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 EEF1GP26641 437 aaKnown RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 VIPR1P32241 457 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 ARL4AP40617 200 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 NOP2P46087 812 aaKnown RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 SEPHS1P49903 392 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MMP14P50281 582 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 JAM2P57087 298 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 RTP1P59025 263 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 RAB1AP62820 205 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 TRPC3Q13507 836 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 HECTD3Q5T447 861 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 THEMIS2Q5TEJ8 643 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 LMBRD2Q68DH5 695 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 GALNT18Q6P9A2 607 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC129Q6ZRS4 1044 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 OSTM1Q86WC4 334 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 HSCBQ8IWL3 235 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 NRSN1Q8IZ57 195 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 RFFLQ8WZ73 363 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 ZNF566Q969W8 418 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MAELQ96JY0 434 aaKnown RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 C7orf26Q96N11 449 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MMP19Q99542 508 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MPHOSPH8Q99549 860 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 BAG1Q99933 345 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 WNT8AQ9H1J5 351 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 OBP2BQ9NPH6 170 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 CHST7Q9NS84 486 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 MRGBPQ9NV56 204 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 CLEC1BQ9P126 229 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 TNFRSF10DQ9UBN6 386 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 CFDP1Q9UEE9 299 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-209ENST00000540819 ODF2LQ9ULJ1 636 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 SRPK3Q9UPE1 567 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 LIMCH1Q9UPQ0 1083 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 PCDHA2Q9Y5H9 948 aa6.14□□□□□ -1.43
PRKDC-209ENST00000540819 TRBV23OR9-2A0A075B6M9 112 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PPH5 198 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 PGPEP1LA6NFU8 196 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TSPY2A6NKD2 308 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 LGALS16A8MUM7 142 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MASP2O00187 686 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 HNRNPDLO14979 420 aaKnown RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 SLC16A6O15403 523 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 P4HA2O15460 535 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MYO1BO43795 1136 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 DNTTP04053 509 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TSPY3P0CV98 308 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TSPY8P0CW00 308 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 AKR1B1P15121 316 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 KRT15P19012 456 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 SDHBP21912 280 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 WASP42768 502 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MAP2K6P52564 334 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 NR1H2P55055 460 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TSPY1Q01534 308 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TMEM62Q0P6H9 643 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 FGL2Q14314 439 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 EPHA7Q15375 998 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms