RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ACTN1P12814 892 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 ARF4P18085 180 aaPredicted RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 RFX1P22670 979 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 POU5F1Q01860 360 aaKnown RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 EEF1DP3Q658K8 133 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 GPR153Q6NV75 609 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 WDR59Q6PJI9 974 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 RRAGAQ7L523 313 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 ARRDC4Q8NCT1 418 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 INTS2Q9H0H0 1204 aaKnown RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 CDT1Q9H211 546 aa15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 CPSF3Q9UKF6 684 aaKnown RBP15.43■□□□□ 0.06
CYB561A3-216ENST00000540755 CCP110O43303 1012 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 DLATP10515 647 aaKnown RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 HARSP12081 509 aaKnown RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 DARSP14868 501 aaKnown RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 APBA1Q02410 837 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 TMEM62Q0P6H9 643 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 SURF1Q15526 300 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 KYAT1Q16773 422 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 E4F1Q66K89 784 aaPredicted RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 GDF6Q6KF10 455 aaPredicted RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 RAD9BQ6WBX8 426 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 CCAR2Q8N163 923 aaKnown RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 C17orf53Q8N3J3 647 aaPredicted RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 OSMRQ99650 979 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 CGRRF1Q99675 332 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 TSEN34Q9BSV6 310 aaKnown RBP15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 PDZD7Q9H5P4 517 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 NLRC4Q9NPP4 1024 aa15.42■□□□□ 0.06
CYB561A3-216ENST00000540755 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 KBTBD13C9JR72 458 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 CSDE1O75534 798 aaKnown RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 OFD1O75665 1012 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 EIF4BP23588 611 aaKnown RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 CRYBB1P53674 252 aaPredicted RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 PTPN11Q06124 597 aaPredicted RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 SFMBT2Q5VUG0 894 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 SLC39A5Q6ZMH5 540 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 C15orf39Q6ZRI6 1047 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 Q7L0L9 218 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 RPAINQ86UA6 219 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 POP1Q99575 1024 aaKnown RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 CHP1Q99653 195 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 TOPORSQ9NS56 1045 aaPredicted RBP15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 APEX2Q9UBZ4 518 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 RALGAPA2Q2PPJ7 1873 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 CITO14578 2027 aa15.41■□□□□ 0.06
CYB561A3-216ENST00000540755 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 TNNI1P19237 187 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 AXLP30530 894 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 TNFSF9P41273 254 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 ACLYP53396 1101 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 AP3M2P53677 418 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 WNT7BP56706 349 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 JAM2P57087 298 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 ZACNQ401N2 412 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 IQCEQ6IPM2 695 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 APBB1IPQ7Z5R6 666 aaPredicted RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 SERINC5Q86VE9 423 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 FBXL13Q8NEE6 735 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CPB2Q96IY4 423 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CDHR5Q9HBB8 845 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 PDE11AQ9HCR9 933 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 AIPL1Q9NZN9 384 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 GINS2Q9Y248 185 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 GRIN2DO15399 1336 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 C4BPAP04003 597 aaKnown RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 TUBB4AP04350 444 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 MRPS6P82932 125 aaKnown RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 MTF1Q14872 753 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 SEZ6Q53EL9 994 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 FAM47CQ5HY64 1035 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CATSPER4Q7RTX7 472 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CDR2LQ86X02 465 aaPredicted RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 WDR49Q8IV35 697 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 FMNL3Q8IVF7 1028 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 THNSL1Q8IYQ7 743 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CCDC170Q8IYT3 715 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 DEFB123Q8N688 67 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 ZNF516Q92618 1163 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 RAB20Q9NX57 234 aa15.4■□□□□ 0.06
CYB561A3-216ENST00000540755 DNAJC12Q9UKB3 198 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms