RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 PRPF31Q8WWY3 499 aaKnown RBP17.26■□□□□ 0.35
PUDP-206ENST00000540122 SLC5A5Q92911 643 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 GJA10Q969M2 543 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 PAAF1Q9BRP4 392 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 SCNM1Q9BWG6 230 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 TEKT3Q9BXF9 490 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
PUDP-206ENST00000540122 AVENQ9NQS1 362 aaPredicted RBP17.26■□□□□ 0.35
PUDP-206ENST00000540122 GCN1Q92616 2671 aaKnown RBP17.26■□□□□ 0.35
PUDP-206ENST00000540122 DMXL2Q8TDJ6 3036 aa17.26■□□□□ 0.35
PUDP-206ENST00000540122 DSPP15924 2871 aaKnown RBP17.25■□□□□ 0.35
PUDP-206ENST00000540122 TSPAN1O60635 241 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 ERLIN2O94905 339 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 RAB33AQ14088 237 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 WDR44Q5JSH3 913 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 TCEAL6Q6IPX3 200 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 NOTUMQ6P988 496 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 VITQ6UXI7 678 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 CACNA2D4Q7Z3S7 1137 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 KBTBD6Q86V97 674 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 RDM1Q8NG50 284 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 GAB3Q8WWW8 586 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 TCEAL3Q969E4 200 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
PUDP-206ENST00000540122 PCDHGA5Q9Y5G8 931 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 LAMA1P25391 3075 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
PUDP-206ENST00000540122 LOC400499M0QZD8 3231 aa17.25■□□□□ 0.35
PUDP-206ENST00000540122 KIF4AO95239 1232 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 PSMC3P17980 439 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 AKAP5P24588 427 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 OR1D2P34982 312 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 MPLP40238 635 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
PUDP-206ENST00000540122 NUCB1Q02818 461 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 LAMTOR4Q0VGL1 99 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 PRSS36Q5K4E3 855 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 SH3PXD2AQ5TCZ1 1133 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 RTL10Q7L3V2 364 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
PUDP-206ENST00000540122 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
PUDP-206ENST00000540122 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 CPB2Q96IY4 423 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 ASB16Q96NS5 453 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 EDEM2Q9BV94 578 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 VPS45Q9NRW7 570 aa17.24■□□□□ 0.35
PUDP-206ENST00000540122 TICRRQ7Z2Z1 1910 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 AKAP13Q12802 2813 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 RPP40O75818 363 aaKnown RBP17.23■□□□□ 0.35
PUDP-206ENST00000540122 AXLP30530 894 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 SOWAHCQ53LP3 525 aaPredicted RBP17.23■□□□□ 0.35
PUDP-206ENST00000540122 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 TCEAL4Q96EI5 215 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 KLK14Q9P0G3 267 aa17.23■□□□□ 0.35
PUDP-206ENST00000540122 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
PUDP-206ENST00000540122 ESYT2A0FGR8 921 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 CASTOR2A6NHX0 329 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 ARNTLO00327 626 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 ZNF263O14978 683 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 EDIL3O43854 480 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 PSMD10O75832 226 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 MLLT6P55198 1093 aaPredicted RBP17.22■□□□□ 0.35
PUDP-206ENST00000540122 NPEPPSP55786 919 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 RTN1Q16799 776 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
PUDP-206ENST00000540122 RNF149Q8NC42 400 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 DEPDC1BQ8WUY9 529 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 MSANTD3Q96H12 275 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
PUDP-206ENST00000540122 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
PUDP-206ENST00000540122 NCANO14594 1321 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 SDK1Q7Z5N4 2213 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 ZMYM2Q9UBW7 1377 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 WDR27A2RRH5 827 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 C4orf47A7E2U8 309 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 PTPN2P17706 415 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 VIPR2P41587 438 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 TUSC3Q13454 348 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 B3GNT9Q6UX72 402 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 SMARCD2Q92925 531 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 CORO1BQ9BR76 489 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 DHX33Q9H6R0 707 aaKnown RBP17.21■□□□□ 0.35
PUDP-206ENST00000540122 C6orf50Q9HD87 102 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 MTRRQ9UBK8 725 aa17.21■□□□□ 0.35
PUDP-206ENST00000540122 FLNBO75369 2602 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms