RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PCDHGA8Q9Y5G5 932 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 PCDHGA7Q9Y5G6 932 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 PCDHGA6Q9Y5G7 932 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 PCDHGA3Q9Y5H0 932 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 PCDHGA2Q9Y5H1 932 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 PMF1-BGLAPU3KQ54 211 aa7.01□□□□□ -1.29
MRE11-209ENST00000540013 SLC12A8A0AV02 714 aa7□□□□□ -1.29
MRE11-209ENST00000540013 FAM170AA1A519 330 aa7□□□□□ -1.29
MRE11-209ENST00000540013 XPOTO43592 962 aaKnown RBP7□□□□□ -1.29
MRE11-209ENST00000540013 NUAK1O60285 661 aa7□□□□□ -1.29
MRE11-209ENST00000540013 CLASP2O75122 1294 aaKnown RBP7□□□□□ -1.29
MRE11-209ENST00000540013 CYP7B1O75881 506 aa7□□□□□ -1.29
MRE11-209ENST00000540013 FAHP16930 419 aa7□□□□□ -1.29
MRE11-209ENST00000540013 PI3P19957 117 aa7□□□□□ -1.29
MRE11-209ENST00000540013 MC3RP41968 323 aa7□□□□□ -1.29
MRE11-209ENST00000540013 FAM193AP78312 1265 aa7□□□□□ -1.29
MRE11-209ENST00000540013 MPP1Q00013 466 aa7□□□□□ -1.29
MRE11-209ENST00000540013 TNFAIP2Q03169 654 aa7□□□□□ -1.29
MRE11-209ENST00000540013 TERF2Q15554 542 aa7□□□□□ -1.29
MRE11-209ENST00000540013 FAAH2Q6GMR7 532 aa7□□□□□ -1.29
MRE11-209ENST00000540013 TEPPQ6URK8 271 aa7□□□□□ -1.29
MRE11-209ENST00000540013 BRINP3Q76B58 766 aa7□□□□□ -1.29
MRE11-209ENST00000540013 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
MRE11-209ENST00000540013 ANKRD18AQ8IVF6 992 aa7□□□□□ -1.29
MRE11-209ENST00000540013 CISD2Q8N5K1 135 aaKnown RBP7□□□□□ -1.29
MRE11-209ENST00000540013 TTLL6Q8N841 843 aa7□□□□□ -1.29
MRE11-209ENST00000540013 CLRN3Q8NCR9 226 aa7□□□□□ -1.29
MRE11-209ENST00000540013 TMEM209Q96SK2 561 aa7□□□□□ -1.29
MRE11-209ENST00000540013 ALG13Q9NP73 1137 aaKnown RBP7□□□□□ -1.29
MRE11-209ENST00000540013 TBC1D22BQ9NU19 505 aa7□□□□□ -1.29
MRE11-209ENST00000540013 BLOC1S4Q9NUP1 217 aa7□□□□□ -1.29
MRE11-209ENST00000540013 C14orf119Q9NWQ9 140 aa7□□□□□ -1.29
MRE11-209ENST00000540013 INVSQ9Y283 1065 aa7□□□□□ -1.29
MRE11-209ENST00000540013 NALCNQ8IZF0 1738 aa7□□□□□ -1.29
MRE11-209ENST00000540013 PTCH1Q13635 1447 aa7□□□□□ -1.29
MRE11-209ENST00000540013 RAB3GAP2Q9H2M9 1393 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 COL16A1Q07092 1604 aaPredicted RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 AHDC1Q5TGY3 1603 aaPredicted RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 KLHL33A6NCF5 533 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 TMCC2O75069 709 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 BAIAP3O94812 1187 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 C8BP07358 591 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 TGFB3P10600 412 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 JAM2P57087 298 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ZBED6P86452 979 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 APBA1Q02410 837 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 SEMA5AQ13591 1074 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ZNF267Q14586 743 aaPredicted RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 SSPNQ14714 243 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 CR1LQ2VPA4 569 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 PAN2Q504Q3 1202 aaKnown RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 DGKKQ5KSL6 1271 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 TCERG1LQ5VWI1 586 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 BTBD8Q5XKL5 378 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 RETSATQ6NUM9 610 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 CCDC149Q6ZUS6 474 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 TMEFF1Q8IYR6 380 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 MYCT1Q8N699 235 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ZBTB34Q8NCN2 500 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 FAM156AQ8NDB6 213 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 NSUN6Q8TEA1 469 aaKnown RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 CLEC4DQ8WXI8 215 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ZBTB10Q96DT7 871 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 PAWRQ96IZ0 340 aaKnown RBP6.99□□□□□ -1.29
MRE11-209ENST00000540013 PWWP2AQ96N64 755 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 BOCQ9BWV1 1114 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 SMURF1Q9HCE7 757 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 SH3GLB2Q9NR46 395 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 PLA2G2DQ9UNK4 145 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ZKSCAN5Q9Y2L8 839 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 SPATA31E1Q6ZUB1 1445 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 ADGRL3Q9HAR2 1447 aa6.99□□□□□ -1.29
MRE11-209ENST00000540013 TCRBV5S4A2TA0A5A2 114 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 MAN2B1O00754 1011 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 AMY2AP04746 511 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 IFIT1P09914 478 aaKnown RBP6.98□□□□□ -1.29
MRE11-209ENST00000540013 PTPN1P18031 435 aaKnown RBP6.98□□□□□ -1.29
MRE11-209ENST00000540013 AMY2BP19961 511 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 IL6STP40189 918 aaPredicted RBP6.98□□□□□ -1.29
MRE11-209ENST00000540013 STAT5AP42229 794 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 LIMS1P48059 325 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 LRRC32Q14392 662 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 NBPF8Q3BBV2 869 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 ATAT1Q5SQI0 421 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 VPS53Q5VIR6 699 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 VASNQ6EMK4 673 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 ABHD17CQ6PCB6 329 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 CYP26C1Q6V0L0 522 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 TBC1D1Q86TI0 1168 aaPredicted RBP6.98□□□□□ -1.29
MRE11-209ENST00000540013 FAM26EQ8N5C1 309 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 OR2C3Q8N628 320 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 KYQ8NBH2 561 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 CHST14Q8NCH0 376 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 SH3RF2Q8TEC5 729 aa6.98□□□□□ -1.29
MRE11-209ENST00000540013 TBCBQ99426 244 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms