RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TTC3P53804 2025 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 IL18RAPO95256 599 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 CXCL8P10145 99 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 CASP4P49662 377 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 PPP2R3AQ06190 1150 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 DMTNQ08495 405 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 SURF1Q15526 300 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
DDB1-216ENST00000539739 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 USP37Q86T82 979 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
DDB1-216ENST00000539739 RPS6KC1Q96S38 1066 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
DDB1-216ENST00000539739 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
DDB1-216ENST00000539739 MEIS3P2A8K0S8 358 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 IKBKBO14920 756 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 KRT13P13646 458 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 CYP24A1Q07973 514 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
DDB1-216ENST00000539739 FAM200AQ8TCP9 573 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 ASB7Q9H672 318 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 METTL14Q9HCE5 456 aaKnown RBP16.75■□□□□ 0.27
DDB1-216ENST00000539739 KLK14Q9P0G3 267 aa16.75■□□□□ 0.27
DDB1-216ENST00000539739 ESPNB1AK53 854 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
DDB1-216ENST00000539739 FGFR1P11362 822 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
DDB1-216ENST00000539739 BMP8BP34820 402 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 SHHQ15465 462 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 C9orf50Q5SZB4 431 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 RASIP1Q5U651 963 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 CRIPAKQ8N1N5 446 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 URGCPQ8TCY9 931 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 HELQQ8TDG4 1101 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 SNX27Q96L92 541 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 GAD1Q99259 594 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ZBED2Q9BTP6 218 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 CBX8Q9HC52 389 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
DDB1-216ENST00000539739 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ARL5CA6NH57 179 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 LACTBL1A8MY62 500 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 OFD1O75665 1012 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ADRB2P07550 413 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 MLH1P40692 756 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 TPM4P67936 248 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 PSMD6Q15008 389 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 FAM117BQ6P1L5 589 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ALKAL1Q6UXT8 129 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 FRMD5Q7Z6J6 570 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 TMEM117Q9H0C3 514 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 CNTN3Q9P232 1028 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
DDB1-216ENST00000539739 INPP5FQ9Y2H2 1132 aa16.74■□□□□ 0.27
DDB1-216ENST00000539739 GOLGA6L19H0YKK7 550 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 DGKIO75912 1065 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 MRE11P49959 708 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 IQCB1Q15051 598 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 XKR4Q5GH76 650 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 NOMO2Q5JPE7 1267 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 CLLU1OSQ5K130 101 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
DDB1-216ENST00000539739 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 CCDC127Q96BQ5 260 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 MRPL9Q9BYD2 267 aaKnown RBP16.73■□□□□ 0.27
DDB1-216ENST00000539739 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
DDB1-216ENST00000539739 TBKBP1A7MCY6 615 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 INPPL1O15357 1258 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 GJB5O95377 273 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 THP07101 528 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 KCNE1P15382 129 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 VAMP7P51809 220 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 ENPEPQ07075 957 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 BFSP1Q12934 665 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 NCAPHQ15003 741 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 PARD3BQ8TEW8 1205 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 KIF12Q96FN5 646 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 CASD1Q96PB1 797 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms