RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MKS1Q9NXB0 559 aa4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 NKIRAS2Q9NYR9 191 aa4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 CRYL1Q9Y2S2 319 aa4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 FHOD1Q9Y613 1164 aa4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 ANKRD11Q6UB99 2663 aaPredicted RBP4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 PREX2Q70Z35 1606 aa4.39□□□□□ -1.71
AC055720.1-201ENST00000539552 PLCH1Q4KWH8 1693 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 FMN1Q68DA7 1419 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ARHGAP35Q9NRY4 1499 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 SLIT1O75093 1534 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 SLIT2O94813 1529 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 GTPBP10A4D1E9 387 aaKnown RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 BLACEA4D250 179 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 RRN3P2A6NIE6 340 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 EYA2O00167 538 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 MEFVO15553 781 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 TOMM70O94826 608 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ZBTB7AO95365 584 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 PYGLP06737 847 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 IL6STP40189 918 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 NOP2P46087 812 aaKnown RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 MAPKAPK2P49137 400 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 GFRA1P56159 465 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 SESN3P58005 492 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 FOXO4P98177 505 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 SEMA5AQ13591 1074 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 PLEKHN1Q494U1 663 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 STYK1Q6J9G0 422 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 PGM2L1Q6PCE3 622 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 RSPO2Q6UXX9 243 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 RPTNQ6XPR3 784 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 DPP9Q86TI2 863 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ADGRG2Q8IZP9 1017 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 FIBCD1Q8N539 461 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 USHBP1Q8N6Y0 703 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 TMEM145Q8NBT3 493 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 FAM156AQ8NDB6 213 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 BRF1Q92994 677 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 RSRC1Q96IZ7 334 aaKnown RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 UBXN10Q96LJ8 280 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 C1QTNF3Q9BXJ4 246 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 CXorf56Q9H5V9 222 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 VTA1Q9NP79 307 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 EMC7Q9NPA0 242 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ANKEF1Q9NU02 776 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 PRR13Q9NZ81 148 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 DBR1Q9UK59 544 aaKnown RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 TMCC3Q9ULS5 477 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 GPR55Q9Y2T6 319 aaPredicted RBP4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF281Q9Y2X9 895 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHA9Q9Y5H5 950 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 THSD7AQ9UPZ6 1657 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 MYO5CQ9NQX4 1742 aa4.38□□□□□ -1.71
AC055720.1-201ENST00000539552 CHD2O14647 1828 aaKnown RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 NEXMIFQ5QGS0 1516 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 SAMD9Q5K651 1589 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 A0A1B0GTL3 188 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 FAM227AF5H4B4 570 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 CBX4O00257 560 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 TBX1O43435 398 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA12O60330 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 ARIH2O95376 493 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 EFEMP2O95967 443 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 GALNSP34059 522 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 CTNNA1P35221 906 aaKnown RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PPM1AP35813 382 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 KRT20P35900 424 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 MMP14P50281 582 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 GPR85P60893 370 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PAK1Q13153 545 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 BLMHQ13867 455 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF267Q14586 743 aaPredicted RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 CLUL1Q15846 466 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 ARHGAP44Q17R89 818 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 IQCEQ6IPM2 695 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 CCDC149Q6ZUS6 474 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 RPAINQ86UA6 219 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PPIL6Q8IXY8 311 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 KRT78Q8N1N4 520 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 ZBTB34Q8NCN2 500 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 LINC00116Q8NCU8 138 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 AFAP1L1Q8TED9 768 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 FNIP1Q8TF40 1166 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 RIPOR3Q96MK2 946 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 TBCBQ99426 244 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 TTLL2Q9BWV7 592 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 LGR4Q9BXB1 951 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 HDAC8Q9BY41 377 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 LMAN2LQ9H0V9 348 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 VPS11Q9H270 941 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 SMOC1Q9H4F8 434 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 TOMM22Q9NS69 142 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 THG1LQ9NWX6 298 aaKnown RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms