RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 GABBR1Q9UBS5 961 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 CLCA2Q9UQC9 943 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 NR2E3Q9Y5X4 410 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 AMY1AP04745 511 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ALDH2P05091 517 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 MYL1P05976 194 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ALOX15P16050 662 aaPredicted RBP8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ALDH1A3P47895 512 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 CTXN1P60606 82 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 MTM1Q13496 603 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ELAVL1Q15717 326 aaKnown RBP8.37□□□□□ -1.07
TRAV11-201ENST00000539512 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 POLNQ7Z5Q5 900 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 APBB1IPQ7Z5R6 666 aaPredicted RBP8.37□□□□□ -1.07
TRAV11-201ENST00000539512 SRGAP1Q7Z6B7 1085 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ANKRD35Q8N283 1001 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
TRAV11-201ENST00000539512 PPP1R35Q8TAP8 253 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 KLHDC4Q8TBB5 520 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 IFI44Q8TCB0 444 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 CEP95Q96GE4 821 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 SAMD11Q96NU1 681 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 MRI1Q9BV20 369 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 GOLGA2P5Q9HBQ8 144 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 SPON1Q9HCB6 807 aa8.37□□□□□ -1.07
TRAV11-201ENST00000539512 LRRC14BA6NHZ5 514 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 B3GALT2O43825 422 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 MTHFD1P11586 935 aaKnown RBP8.36□□□□□ -1.07
TRAV11-201ENST00000539512 ALAS1P13196 640 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 FPR1P21462 350 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 PCSK1P29120 753 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 HK3P52790 923 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 RAP2BP61225 183 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 TLE1Q04724 770 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 MFSD14BQ5SR56 506 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 TCTN3Q6NUS6 607 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 LIMS2Q7Z4I7 341 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 GSPT2Q8IYD1 628 aaKnown RBP8.36□□□□□ -1.07
TRAV11-201ENST00000539512 SH2D3CQ8N5H7 860 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 ZFP28Q8NHY6 868 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 BORCS6Q96GS4 357 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 MRGPRX4Q96LA9 322 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 ENKD1Q9H0I2 346 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 C11orf54Q9H0W9 315 aaPredicted RBP8.36□□□□□ -1.07
TRAV11-201ENST00000539512 ABCF2Q9UG63 623 aa8.36□□□□□ -1.07
TRAV11-201ENST00000539512 KIAA0391O15091 583 aaKnown RBP8.35□□□□□ -1.07
TRAV11-201ENST00000539512 PJA2O43164 708 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 STC2O76061 302 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 FTH1P19P0C7X4 201 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 MALP21145 153 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 CLRN1P58418 232 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 EFCAB12Q6NXP0 572 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 SGMS1Q86VZ5 419 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 FUKQ8N0W3 1084 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 AOPEPQ8N6M6 819 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 MB21D1Q8N884 522 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 ST8SIA2Q92186 375 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 TFAP2CQ92754 450 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 TIFAQ96CG3 184 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 PACSIN1Q9BY11 444 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 TMEM60Q9H2L4 133 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 WDCPQ9H6R7 721 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 ARMT1Q9H993 441 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 DDX20Q9UHI6 824 aaKnown RBP8.35□□□□□ -1.07
TRAV11-201ENST00000539512 SLC30A1Q9Y6M5 507 aa8.35□□□□□ -1.07
TRAV11-201ENST00000539512 CAPN8A6NHC0 703 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 CAPN14A8MX76 684 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 CXorf49A8MYA2 514 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 PRICKLE3O43900 615 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 TUSC2O75896 110 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 CD1AP06126 327 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 GNAI3P08754 354 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 NBPF7P0C2Y1 421 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 GNAI1P63096 354 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 LLGL1Q15334 1064 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 ANO6Q4KMQ2 910 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 ZNF529Q6P280 563 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 DOK3Q7L591 496 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 XYLT1Q86Y38 959 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 PLXDC1Q8IUK5 500 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 ELOA2Q8IYF1 753 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 NLGN4YQ8NFZ3 816 aaPredicted RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 SARS2Q9NP81 518 aaKnown RBP8.34□□□□□ -1.07
TRAV11-201ENST00000539512 POGKQ9P215 609 aa8.34□□□□□ -1.07
TRAV11-201ENST00000539512 CYP27B1O15528 508 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 COMTP21964 271 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 MGAT1P26572 445 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 CACNB3P54284 484 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 JAG1P78504 1218 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 ATP8B2P98198 1209 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 FOXL1Q12952 345 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 FGL2Q14314 439 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 NFIXQ14938 502 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 PABPC1LQ4VXU2 614 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms