RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-206ENST00000539417 PCDHB13Q9Y5F0 798 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 SMIM28A0A1B0GU29 152 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 SCP2P22307 547 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 ACOT2P49753 483 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 SOX4Q06945 474 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 GRIK3Q13003 919 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 NELFCDQ8IXH7 590 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 FAM193BQ96PV7 902 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 PPP1R10Q96QC0 940 aaKnown RBP17.2■□□□□ 0.34
RPAIN-206ENST00000539417 RPS6KC1Q96S38 1066 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 CBWD1Q9BRT8 395 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 UNC80Q8N2C7 3258 aa17.2■□□□□ 0.34
RPAIN-206ENST00000539417 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 OGTO15294 1046 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 TGFB1I1O43294 461 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 OR1G1P47890 313 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 ALDH7A1P49419 539 aaKnown RBP17.19■□□□□ 0.34
RPAIN-206ENST00000539417 WNT7BP56706 349 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 PLCB3Q01970 1234 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 ADGRD2Q7Z7M1 963 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-206ENST00000539417 IGSF21Q96ID5 467 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 PCIF1Q9H4Z3 704 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
RPAIN-206ENST00000539417 CITO14578 2027 aa17.19■□□□□ 0.34
RPAIN-206ENST00000539417 THP07101 528 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 GTF2F1P35269 517 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 POSTNQ15063 836 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 APBB1IPQ7Z5R6 666 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 SYCP3Q8IZU3 236 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 POMGNT1Q8WZA1 660 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 SAAL1Q96ER3 474 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 TMEM175Q9BSA9 504 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 AGO2Q9UKV8 859 aaKnown RBP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 FAN1Q9Y2M0 1017 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 PDCD11Q14690 1871 aaKnown RBP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 TTC26A0AVF1 554 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 GOLGA8IPA6NC78 632 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 GOLGA8JA6NMD2 632 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 LACTBL1A8MY62 500 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 EIF3DO15371 548 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 ALDH2P05091 517 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 ABCD1P33897 745 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 YARSP54577 528 aaKnown RBP17.18■□□□□ 0.34
RPAIN-206ENST00000539417 TUSC3Q13454 348 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 ALCAMQ13740 583 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 TCEAL5Q5H9L2 206 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 CD300LGQ6UXG3 332 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 HASPINQ8TF76 798 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 FAM84AQ96KN4 292 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 EXOC7Q9UPT5 735 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 ANK1P16157 1881 aa17.18■□□□□ 0.34
RPAIN-206ENST00000539417 FSCN2O14926 492 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 EFEMP2O95967 443 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 MYL1P05976 194 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 CLTAP09496 248 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 KCNE1P15382 129 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 GUCY2FP51841 1108 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 FAM213AQ9BRX8 229 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 TUBGCP4Q9UGJ1 667 aa17.17■□□□□ 0.34
RPAIN-206ENST00000539417 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 CLIC2O15247 247 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 RHOBTB3O94955 611 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 KIF4AO95239 1232 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 PPM1AP35813 382 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 CLCNKBP51801 687 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 UBE2HP62256 183 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 PTPROQ16827 1216 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 PLPP4Q5VZY2 271 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 SCARA3Q6AZY7 606 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 SLFN12LQ6IEE8 588 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 SMYD4Q8IYR2 804 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-206ENST00000539417 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 TMEM169Q96HH4 297 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 B3GALT6Q96L58 329 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 TIGD1Q96MW7 591 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 GPR62Q9BZJ7 368 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-206ENST00000539417 MAPK8IP1Q9UQF2 711 aa17.16■□□□□ 0.34
RPAIN-206ENST00000539417 LZTS1Q9Y250 596 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms