RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 BLVRAP53004 296 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 PRKCEQ02156 737 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 GOLGA7BQ2TAP0 167 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 IER5Q5VY09 327 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 ATG9AQ7Z3C6 839 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
LINC00346-201ENST00000538077 PROM2Q8N271 834 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 SMARCAD1Q9H4L7 1026 aa11.84□□□□□ -0.51
LINC00346-201ENST00000538077 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
LINC00346-201ENST00000538077 EIF4E1BA6NMX2 242 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MAPK13O15264 365 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ITPRIPL1Q6GPH6 555 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SYT2Q8N9I0 419 aaPredicted RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 PI4K2AQ9BTU6 479 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DDX47Q9H0S4 455 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ENTPD7Q9NQZ7 604 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DDX56Q9NY93 547 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MTMR4Q9NYA4 1195 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DONSONQ9NYP3 566 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 KLRK1P26718 216 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 EEF1DP29692 281 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SLC8A1P32418 973 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 EPHA7Q15375 998 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SPDYAQ5MJ70 313 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 UNC45AQ9H3U1 944 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CNOT10Q9H9A5 744 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 H0Y3Z8 333 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TLR2O60603 784 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MAP4P27816 1152 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MAP2K2P36507 400 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ERFP50548 548 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CLCN6P51797 869 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 RAD51Q06609 339 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CUL1Q13616 776 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SPARCL1Q14515 664 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CASP8Q14790 479 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TBC1D1Q86TI0 1168 aaPredicted RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DPF3Q92784 378 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TNIP3Q96KP6 325 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DDX50Q9BQ39 737 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ZFP69BQ9UJL9 534 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DIS3Q9Y2L1 958 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 DIP2CQ9Y2E4 1556 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 KRT17Q04695 432 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SPATA31A1Q5TZJ5 1347 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 PODXLO00592 558 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CAPN15O75808 1086 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 ATPAF2Q8N5M1 289 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
LINC00346-201ENST00000538077 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
LINC00346-201ENST00000538077 TRAPPC3O43617 180 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 TADA3O75528 432 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 EYA4O95677 639 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 MYBL1P10243 752 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 USP11P51784 963 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 MTM1Q13496 603 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 VPS72Q15906 364 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 KCNV1Q6PIU1 500 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 CCDC137Q6PK04 289 aaKnown RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 SNF8Q96H20 258 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 EEF2KO00418 725 aaKnown RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 CETPP11597 493 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 FCGRTP55899 365 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 SREBF2Q12772 1141 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 TAF11Q15544 211 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms