RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 TCP11Q8WWU5 503 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 ELSPBP1Q96BH3 223 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 IER2Q9BTL4 223 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 WDFY3Q8IZQ1 3526 aa12.4□□□□□ -0.43
CLPB-208ENST00000538021 EML1O00423 815 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 ZZEF1O43149 2961 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 DKC1O60832 514 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLPB-208ENST00000538021 KIF4AO95239 1232 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 NPTXRO95502 500 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 RHOP08100 348 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 POU2F2P09086 479 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 CEBPBP17676 345 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 PTENP60484 403 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 TUSC3Q13454 348 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 EMC2Q15006 297 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLPB-208ENST00000538021 RNF20Q5VTR2 975 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 POTEHQ6S545 545 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
CLPB-208ENST00000538021 C12orf50Q8NA57 414 aaPredicted RBP12.39□□□□□ -0.43
CLPB-208ENST00000538021 TRMT61BQ9BVS5 477 aaKnown RBP12.39□□□□□ -0.43
CLPB-208ENST00000538021 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 F5P12259 2224 aa12.39□□□□□ -0.43
CLPB-208ENST00000538021 AXIN1O15169 862 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 ARF4P18085 180 aaPredicted RBP12.38□□□□□ -0.43
CLPB-208ENST00000538021 GDI1P31150 447 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 CNR2P34972 360 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 RCAN1P53805 252 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 NLRP5P59047 1200 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 RAB33AQ14088 237 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
CLPB-208ENST00000538021 CCDC6Q16204 474 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 PDXDC1Q6P996 788 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 IRF7Q92985 503 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 MTRQ99707 1265 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 ZFP14Q9HCL3 533 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
CLPB-208ENST00000538021 ZMIZ1Q9ULJ6 1067 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
CLPB-208ENST00000538021 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 B4GALT5O43286 388 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 LRG1P02750 347 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 P4HBP07237 508 aaKnown RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 C1QTNF9P0C862 333 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 CHRNB1P11230 501 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 PTPN2P17706 415 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 FCARP24071 287 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 CCNE1P24864 410 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 LIMK1P53667 647 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 ELAVL2Q12926 359 aaKnown RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 TFDP1Q14186 410 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 GAS6Q14393 721 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 MXD4Q14582 209 aaPredicted RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 XKR9Q5GH70 373 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 FAM78AQ5JUQ0 283 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 SPEM1Q8N4L4 309 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 ARRDC1-AS1Q9H2J1 176 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
CLPB-208ENST00000538021 CDY1Q9Y6F8 540 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
CLPB-208ENST00000538021 LAMA1P25391 3075 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 CYP3A7-CYP3A51PA0A087WV96 503 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 TM4SF5O14894 197 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 KCNK5O95279 499 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 CYP3A7P24462 503 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 AMHR2Q16671 573 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 STPG1Q5TH74 334 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 UNQ6494/PRO21346Q6UXR6 183 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.36□□□□□ -0.43
CLPB-208ENST00000538021 MAP4K3Q8IVH8 894 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 LXNQ9BS40 222 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
CLPB-208ENST00000538021 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
CLPB-208ENST00000538021 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
CLPB-208ENST00000538021 PRRG1O14668 218 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ZNF263O14978 683 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ZBTB39O15060 712 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 THP07101 528 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 PSMC3P17980 439 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ELF1P32519 619 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 VIPR2P41587 438 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 PPP2R5CQ13362 524 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 CAPSQ13938 189 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms