RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 HNRNPCL1O60812 293 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 GH1P01241 217 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SCG2P13521 617 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 TAC1P20366 129 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 CDK7P50613 346 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 RTP1P59025 263 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 PTK2Q05397 1052 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 MAP7Q14244 749 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 RASA3Q14644 834 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 GALNT17Q6IS24 598 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 CABP7Q86V35 215 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 LENG1Q96BZ8 264 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 TMEM39BQ9GZU3 492 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 TMEM60Q9H2L4 133 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 HSFX1Q9UBD0 423 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 WDR37Q9Y2I8 494 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 PCNTO95613 3336 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 GDF11O95390 407 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 STRN3Q13033 797 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 MPP2Q14168 576 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 CLUL1Q15846 466 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 WDR72Q3MJ13 1102 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF571Q7Z3V5 609 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 ASCC2Q9H1I8 757 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-221ENST00000537934 LAD1O00515 517 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CAPN9O14815 690 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ITGA2BP08514 1039 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 EIF4BP23588 611 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CALML3P27482 149 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 NOVP48745 357 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 GRM4Q14833 912 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ALKBH5Q6P6C2 394 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZBED3Q96IU2 234 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 AK8Q96MA6 479 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 DDX50Q9BQ39 737 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 STX18Q9P2W9 335 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF212Q9UDV6 495 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PODXLO00592 558 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZCCHC18P0CG32 403 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 BRAFP15056 766 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CCNFP41002 786 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 RPL21P46778 160 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 JAG1P78504 1218 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 SEPT14Q6ZU15 432 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 TRMT10CQ7L0Y3 403 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 BLIDQ8IZY5 108 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 TSG101Q99816 390 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 RIC8AQ9NPQ8 531 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ARMCX3Q9UH62 379 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PFASO15067 1338 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 MAGEB2O15479 319 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CYTH3O43739 400 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 TBX10O75333 385 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PSMG1O95456 288 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CBX6O95503 412 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PTGIRP43119 386 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 SULT2A1Q06520 285 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms