RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CXCR5P32302 372 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 CLRN1P58418 232 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 MED25Q71SY5 747 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 GPR149Q86SP6 731 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 FAM98AQ8NCA5 519 aaKnown RBP7.3□□□□□ -1.24
CCDC7-208ENST00000537047 STON2Q8WXE9 905 aa7.3□□□□□ -1.24
CCDC7-208ENST00000537047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
CCDC7-208ENST00000537047 CDKL5O76039 1030 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 PRSS23O95084 383 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 HLA-DOAP06340 250 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 ENPP1P22413 925 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 ZNF572Q7Z3I7 529 aaPredicted RBP7.29□□□□□ -1.24
CCDC7-208ENST00000537047 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 MAPKAPK5Q8IW41 473 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 RHOT2Q8IXI1 618 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 UBR7Q8N806 425 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 USP7Q93009 1102 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 QRSL1Q9H0R6 528 aaKnown RBP7.29□□□□□ -1.24
CCDC7-208ENST00000537047 ATP11BQ9Y2G3 1177 aa7.29□□□□□ -1.24
CCDC7-208ENST00000537047 ESRRBO95718 433 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 ALOX15P16050 662 aaPredicted RBP7.28□□□□□ -1.24
CCDC7-208ENST00000537047 ZNF362Q5T0B9 420 aaPredicted RBP7.28□□□□□ -1.24
CCDC7-208ENST00000537047 ZKSCAN2Q63HK3 967 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 AFMIDQ63HM1 303 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 TMEM132CQ8N3T6 1108 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 Q96MF0 132 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 LDAHQ9H6V9 325 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 DMRT3Q9NQL9 472 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 AATKQ6ZMQ8 1374 aa7.28□□□□□ -1.24
CCDC7-208ENST00000537047 MGST3O14880 152 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 PJA2O43164 708 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 SLC6A2P23975 617 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 OCA2Q04671 838 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 STRN3Q13033 797 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 RNF180Q86T96 592 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 GPR156Q8NFN8 814 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 OR7D4Q8NG98 312 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 MRI1Q9BV20 369 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 ALOXE3Q9BYJ1 711 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 INSL6Q9Y581 213 aa7.27□□□□□ -1.25
CCDC7-208ENST00000537047 SREBF1P36956 1147 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 MPP3Q13368 585 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 DHCR24Q15392 516 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 IFT22Q9H7X7 185 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 SIK3Q9Y2K2 1263 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 MAST3O60307 1309 aa7.26□□□□□ -1.25
CCDC7-208ENST00000537047 PHF2O75151 1096 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 FOSP01100 380 aaPredicted RBP7.25□□□□□ -1.25
CCDC7-208ENST00000537047 SNRPA1P09661 255 aaKnown RBP7.25□□□□□ -1.25
CCDC7-208ENST00000537047 RAP2AP10114 183 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 FPR1P21462 350 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 CD38P28907 300 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 SESN3P58005 492 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 PPP3CAQ08209 521 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 ADRM1Q16186 407 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 BOLLQ8N9W6 283 aaKnown RBP7.25□□□□□ -1.25
CCDC7-208ENST00000537047 NACC2Q96BF6 587 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 RNF31Q96EP0 1072 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 MYOCQ99972 504 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 BCO1Q9HAY6 547 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 TESQ9UGI8 421 aaKnown RBP7.25□□□□□ -1.25
CCDC7-208ENST00000537047 USP25Q9UHP3 1055 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 SCOCQ9UIL1 159 aa7.25□□□□□ -1.25
CCDC7-208ENST00000537047 A0A1B0GTW7 788 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 ALDH1A3P47895 512 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 PQLC1Q8N2U9 271 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 HOXB13Q92826 284 aaPredicted RBP7.24□□□□□ -1.25
CCDC7-208ENST00000537047 FUBP3Q96I24 572 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC7-208ENST00000537047 RAX2Q96IS3 184 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 LRFN3Q9BTN0 628 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 WDR26Q9H7D7 661 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 FBXO34Q9NWN3 711 aa7.24□□□□□ -1.25
CCDC7-208ENST00000537047 FGFR4P22455 802 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 FDXRP22570 491 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 ECHS1P30084 290 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 SCAND1P57086 179 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 SIM1P81133 766 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-208ENST00000537047 MUM1Q2TAK8 710 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 SP5Q6BEB4 398 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-208ENST00000537047 KCNK18Q7Z418 384 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 LMBR1Q8WVP7 490 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 UHRF1Q96T88 793 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-208ENST00000537047 TTC1Q99614 292 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 IFT122Q9HBG6 1241 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 SLC23A1Q9UHI7 598 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 TLK1Q9UKI8 766 aa7.23□□□□□ -1.25
CCDC7-208ENST00000537047 GOLGA8AA7E2F4 631 aa7.22□□□□□ -1.25
CCDC7-208ENST00000537047 GYS2P54840 703 aa7.22□□□□□ -1.25
CCDC7-208ENST00000537047 CXADRP78310 365 aa7.22□□□□□ -1.25
CCDC7-208ENST00000537047 HSD11B2P80365 405 aa7.22□□□□□ -1.25
CCDC7-208ENST00000537047 ERCC6LQ2NKX8 1250 aa7.22□□□□□ -1.25
CCDC7-208ENST00000537047 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
CCDC7-208ENST00000537047 DDX46Q7L014 1031 aaKnown RBP7.22□□□□□ -1.25
CCDC7-208ENST00000537047 AUTS2Q8WXX7 1259 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms