RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CREMQ03060 361 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 SNAPC2Q13487 334 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 POLD3Q15054 466 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-208ENST00000536710 KCNA10Q16322 511 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 ATP2B3Q16720 1220 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 FLYWCH1Q4VC44 716 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 ZNF648Q5T619 568 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-208ENST00000536710 APOA5Q6Q788 366 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 ZNF761Q86XN6 746 aaPredicted RBP6.7□□□□□ -1.34
PRKDC-208ENST00000536710 FAM186BQ8IYM0 893 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 SARS2Q9NP81 518 aaKnown RBP6.7□□□□□ -1.34
PRKDC-208ENST00000536710 CD320Q9NPF0 282 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 TAGLN3Q9UI15 199 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 PHGDHO43175 533 aaKnown RBP6.69□□□□□ -1.34
PRKDC-208ENST00000536710 B4GALT4O60513 344 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 EIF3JO75822 258 aaKnown RBP6.69□□□□□ -1.34
PRKDC-208ENST00000536710 KITP10721 976 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 CTXN1P60606 82 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 APBA1Q02410 837 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 HGFACQ04756 655 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 MTM1Q13496 603 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 VPS72Q15906 364 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 RNF151Q2KHN1 245 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 KHDC1LQ5JSQ8 128 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 CMTM4Q8IZR5 234 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 SPICE1Q8N0Z3 855 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 LINC01356Q8N9X3 169 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 ACRBPQ8NEB7 543 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 GJA10Q969M2 543 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 ARPC5LQ9BPX5 153 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 LRRC27Q9C0I9 530 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 C12orf65Q9H3J6 166 aaKnown RBP6.69□□□□□ -1.34
PRKDC-208ENST00000536710 WDCPQ9H6R7 721 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 NLRC4Q9NPP4 1024 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 PCDHA6Q9UN73 950 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 SNX13Q9Y5W8 968 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 ZMYM3Q14202 1370 aa6.69□□□□□ -1.34
PRKDC-208ENST00000536710 RHPN2P1A8MT19 583 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 TEX33O43247 280 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 NUAK1O60285 661 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 CD1AP06126 327 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 SLC7A1P30825 629 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 RAP1GAPP47736 663 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 ALDH1A3P47895 512 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 ATP8B2P98198 1209 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 SP140Q13342 867 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 MORC3Q14149 939 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 PKN1Q16512 942 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 AFMIDQ63HM1 303 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 ZNF572Q7Z3I7 529 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-208ENST00000536710 TMEM151BQ8IW70 566 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 SMC5Q8IY18 1101 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 VPS37AQ8NEZ2 397 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 BRIX1Q8TDN6 353 aaKnown RBP6.68□□□□□ -1.34
PRKDC-208ENST00000536710 CASKIN2Q8WXE0 1202 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 TNPO1Q92973 898 aaKnown RBP6.68□□□□□ -1.34
PRKDC-208ENST00000536710 ARL8AQ96BM9 186 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 IL17RAQ96F46 866 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 CCDC138Q96M89 665 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 GPHA2Q96T91 129 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 PTPN18Q99952 460 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 ATP6V0A4Q9HBG4 840 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 KIAA1586Q9HCI6 787 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 IL23AQ9NPF7 189 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 SLAMF7Q9NQ25 335 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 OGDHLQ9ULD0 1010 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 CORO2BQ9UQ03 480 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 DMTF1Q9Y222 760 aa6.68□□□□□ -1.34
PRKDC-208ENST00000536710 UBE2QL1A1L167 161 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 TSPAN15O95858 294 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 FTH1P19P0C7X4 201 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 MYF5P13349 255 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 SERPINB3P29508 390 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 HTR3AP46098 478 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 GZMKP49863 264 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 RAC3P60763 192 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 PTH1RQ03431 593 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 LONRF3Q496Y0 759 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 SKAP1Q86WV1 359 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 RABGGTAQ92696 567 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 CEP95Q96GE4 821 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 APIPQ96GX9 242 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-208ENST00000536710 RNF114Q9Y508 228 aa6.67□□□□□ -1.34
PRKDC-208ENST00000536710 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 F2RL2O00254 374 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 KIAA0391O15091 583 aaKnown RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 KPNA5O15131 536 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 SLC26A4O43511 780 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 BRAFP15056 766 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 ALOX15P16050 662 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 ATP5JP18859 108 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 PRDX5P30044 214 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 PIK3CBP42338 1070 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 FLT3LGP49771 235 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms