RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 HSDL1Q3SXM5 330 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 TDRD12Q587J7 1177 aaKnown RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 TTC19Q6DKK2 380 aaPredicted RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 IQCKQ8N0W5 287 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 C7orf31Q8N865 590 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 RASGRP4Q8TDF6 673 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 BAP1Q92560 729 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 PBKQ96KB5 322 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 SPATA33Q96N06 139 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 ZIM3Q96PE6 472 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 PLIN2Q99541 437 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 TLR10Q9BXR5 811 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 BZW2Q9Y6E2 419 aaKnown RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 GOLGA6L7A0A1B0GV03 622 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 MAFGO15525 162 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 F2P00734 622 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 HOXD8P13378 290 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 IGFBP4P22692 258 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 SMTNP53814 917 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 BIRC3Q13489 604 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC85BQ15834 202 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TCTN1Q2MV58 587 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TTMPQ5BVD1 217 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CEP85LQ5SZL2 805 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 KRT79Q5XKE5 535 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 MAB21L3Q8N8X9 362 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 LMBR1Q8WVP7 490 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 WNT8BQ93098 351 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 RSRC1Q96IZ7 334 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 ACTR5Q9H9F9 607 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 RFXAPO00287 272 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PPP1R37O75864 691 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TGFB3P10600 412 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CKBP12277 381 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 SELPP16109 830 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 NR1D1P20393 614 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 GCKP35557 465 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 HSPA9P38646 679 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TECP42680 631 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 RPS6KA3P51812 740 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CALCRLQ16602 461 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TRIM71Q2Q1W2 868 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 LRRC8DQ7L1W4 858 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 RAD54LQ92698 747 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 P3H4Q92791 437 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
CHRNB1-202ENST00000536404 TRANK1O15050 2925 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 NBNO60934 754 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 ARHGEF15O94989 841 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 CA3P07451 260 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 PLEKP08567 350 aaPredicted RBP12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 LSP1P33241 339 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 GUCY2DQ02846 1103 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 CLUL1Q15846 466 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC18A3Q16572 532 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 SLC5A9Q2M3M2 681 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 TSEN2Q8NCE0 465 aaKnown RBP12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 C16orf70Q9BSU1 422 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 NT5C3AQ9H0P0 336 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 CERS4Q9HA82 394 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 PLCB1Q9NQ66 1216 aa12.5□□□□□ -0.41
CHRNB1-202ENST00000536404 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms