RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PABPC5Q96DU9 382 aaKnown RBP24.25■■□□□ 1.47
VPS37C-202ENST00000535818 HAPLN2Q9GZV7 340 aa24.25■■□□□ 1.47
VPS37C-202ENST00000535818 ZBP1Q9H171 429 aa24.25■■□□□ 1.47
VPS37C-202ENST00000535818 MARCH5Q9NX47 278 aa24.25■■□□□ 1.47
VPS37C-202ENST00000535818 ANKRD63C9JTQ0 380 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 OGTO15294 1046 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 CLTAP09496 248 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 CASP1P29466 404 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 GTF2F1P35269 517 aaKnown RBP eCLIP24.24■■□□□ 1.47
VPS37C-202ENST00000535818 CASP5P51878 434 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 TFF2Q03403 129 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 SLFN12LQ6IEE8 588 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 SLC39A4Q6P5W5 647 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 UNC13DQ70J99 1090 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 SYCP3Q8IZU3 236 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 TMEM87AQ8NBN3 555 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 RABGGTAQ92696 567 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 STRA6Q9BX79 667 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 CACNG4Q9UBN1 327 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 MYO7AQ13402 2215 aa24.24■■□□□ 1.47
VPS37C-202ENST00000535818 SMIM28A0A1B0GU29 152 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 HIDE1A8MVS5 230 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 CXCL8P10145 99 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 MRPS5P82675 430 aaKnown RBP24.23■■□□□ 1.47
VPS37C-202ENST00000535818 CUL4BQ13620 913 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 HSP90AA2PQ14568 343 aaPredicted RBP24.23■■□□□ 1.47
VPS37C-202ENST00000535818 FAM26FQ5R3K3 315 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 HPS3Q969F9 1004 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 PAGE5Q96GU1 130 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 PPP1R10Q96QC0 940 aaKnown RBP24.23■■□□□ 1.47
VPS37C-202ENST00000535818 FGFBP2Q9BYJ0 223 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 CNTN3Q9P232 1028 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 CITO14578 2027 aa24.23■■□□□ 1.47
VPS37C-202ENST00000535818 A0A0B4J269 797 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 FAM237AA0A1B0GTK4 181 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.22■■□□□ 1.47
VPS37C-202ENST00000535818 FSD2A1L4K1 749 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 TISP43B9A030 160 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 F8W810 466 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 PER2O15055 1255 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 TADA2AO75478 443 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 PRPF6O94906 941 aaKnown RBP24.22■■□□□ 1.47
VPS37C-202ENST00000535818 CXCL14O95715 111 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 CTSAP10619 480 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 KCNA5P22460 613 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 KCNA1Q09470 495 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 NAB2Q15742 525 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 ALKAL1Q6UXT8 129 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 AUTS2Q8WXX7 1259 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 POMGNT1Q8WZA1 660 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 CDCA3Q99618 268 aaPredicted RBP24.22■■□□□ 1.47
VPS37C-202ENST00000535818 PAAF1Q9BRP4 392 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 HERC2P3Q9BVR0 1158 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 VN1R3Q9BXE9 311 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 GOLPH3LQ9H4A5 285 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 TMEM206Q9H813 350 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 RPF1Q9H9Y2 349 aaKnown RBP24.22■■□□□ 1.47
VPS37C-202ENST00000535818 SLC38A7Q9NVC3 462 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 CHMP5Q9NZZ3 219 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 ADAM28Q9UKQ2 775 aa24.22■■□□□ 1.47
VPS37C-202ENST00000535818 PVALEFA0A1B0GWK0 134 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 SOD2P04179 222 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 URODP06132 367 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 TNFSF9P41273 254 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 NDUFV1P49821 464 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 PPP2R3AQ06190 1150 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 POSTNQ15063 836 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 SLC10A6Q3KNW5 377 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 XKR4Q5GH76 650 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 MRPL43Q8N983 215 aaKnown RBP24.21■■□□□ 1.47
VPS37C-202ENST00000535818 HASPINQ8TF76 798 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 UROC1Q96N76 676 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 IKZF4Q9H2S9 585 aa24.21■■□□□ 1.47
VPS37C-202ENST00000535818 AGO2Q9UKV8 859 aaKnown RBP24.21■■□□□ 1.47
VPS37C-202ENST00000535818 TRIP11Q15643 1979 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.2■■□□□ 1.46
VPS37C-202ENST00000535818 C2orf71A6NGG8 1288 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 LINC01565O15544 149 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 KCNE1P15382 129 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 DUSP6Q16828 381 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 ZBTB41Q5SVQ8 909 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 FUT10Q6P4F1 479 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 EFHBQ8N7U6 833 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 ZMAT2Q96NC0 199 aaKnown RBP24.2■■□□□ 1.46
VPS37C-202ENST00000535818 ASB2Q96Q27 587 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 PLEKHA5Q9HAU0 1116 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 GOLGA2P5Q9HBQ8 144 aa24.2■■□□□ 1.46
VPS37C-202ENST00000535818 SF3B1O75533 1304 aaKnown RBP eCLIP24.19■■□□□ 1.465e-8■■■■■ 206.8
VPS37C-202ENST00000535818 KIF4AO95239 1232 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 COL19A1Q14993 1142 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 TJAP1Q5JTD0 557 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 KIAA1841Q6NSI8 718 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 GLIS3Q8NEA6 775 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 FAM212AQ96EL1 285 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 CCDC34Q96HJ3 373 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 MRPL17Q9NRX2 175 aaKnown RBP24.19■■□□□ 1.46
VPS37C-202ENST00000535818 EXOC1Q9NV70 894 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 STYXL1Q9Y6J8 313 aa24.19■■□□□ 1.46
VPS37C-202ENST00000535818 H3BQ06 376 aaPredicted RBP24.18■■□□□ 1.46
VPS37C-202ENST00000535818 C2CD2LO14523 706 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms