RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NXNQ6DKJ4 435 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 KCNK18Q7Z418 384 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 TTC7BQ86TV6 843 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 TCEAL8Q8IYN2 117 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 MYO1HQ8N1T3 1032 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 GPR156Q8NFN8 814 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 TGFBRAP1Q8WUH2 860 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 CCDC8Q9H0W5 538 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-202ENST00000535689 NMRK2Q9NPI5 230 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 PRDM11Q9NQV5 511 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 MOCS1Q9NZB8 636 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 ZIM2Q9NZV7 527 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 EDARQ9UNE0 448 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 POLHQ9Y253 713 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 CFAP20Q9Y6A4 193 aaKnown RBP4.17□□□□□ -1.74
SNHG1-202ENST00000535689 TNS3Q68CZ2 1445 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 RRBP1Q9P2E9 1410 aaKnown RBP4.17□□□□□ -1.74
SNHG1-202ENST00000535689 TNKSO95271 1327 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 SPATA31A1Q5TZJ5 1347 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 NRXN3Q9Y4C0 1643 aa4.17□□□□□ -1.74
SNHG1-202ENST00000535689 RGPD8O14715 1765 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-202ENST00000535689 RREB1Q92766 1687 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 AATKQ6ZMQ8 1374 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CDC42BPGQ6DT37 1551 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 PRAG1Q86YV5 1406 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 ARHGAP6O43182 974 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 AKAP10O43572 662 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 AKR1B10O60218 316 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 PRAMEF4O60810 478 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CAND2O75155 1236 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 NDUFS2O75306 463 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 VSIG10L2P0DP72 767 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CRHR1P34998 444 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 KIR2DL3P43628 341 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 MRE11P49959 708 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 RAB27AP51159 221 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 SRSF2Q01130 221 aaKnown RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 PCOLCEQ15113 449 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 SLC15A2Q16348 729 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 FAM102BQ5T8I3 360 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 AGBL4Q5VU57 503 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 MFSD5Q6N075 450 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 KBTBD2Q8IY47 623 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 TCP11L2Q8N4U5 519 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 ZNF526Q8TF50 670 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 JPH3Q8WXH2 748 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 RABGGTAQ92696 567 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 FAM167AQ96KS9 214 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 C8orf48Q96LL4 319 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 UHRF1Q96T88 793 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CDC5LQ99459 802 aaKnown RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 TMEM140Q9NV12 185 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 GNL3LQ9NVN8 582 aaKnown RBP4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CHPF2Q9P2E5 772 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 RBPJLQ9UBG7 517 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 IP6K2Q9UHH9 426 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 CDC42EP3Q9UKI2 254 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 NR2E1Q9Y466 385 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 SLC4A7Q9Y6M7 1214 aa4.16□□□□□ -1.74
SNHG1-202ENST00000535689 EIF3AQ14152 1382 aaKnown RBP4.15□□□□□ -1.74
SNHG1-202ENST00000535689 ABCC11Q96J66 1382 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 ANKRD30BQ9BXX2 1392 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 NUP188Q5SRE5 1749 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 RGPD3A6NKT7 1758 aaPredicted RBP4.15□□□□□ -1.74
SNHG1-202ENST00000535689 RGPD4Q7Z3J3 1758 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 NAIPQ13075 1403 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 VPS8Q8N3P4 1428 aa4.15□□□□□ -1.74
SNHG1-202ENST00000535689 FFAR3O14843 346 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 SGTAO43765 313 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PLIN1O60240 522 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ABLIM3O94929 683 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PF4V1P10720 104 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 COL6A1P12109 1028 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 IL2RBP14784 551 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 GSPT1P15170 499 aaKnown RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 CSF2RBP32927 897 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PRELPP51888 382 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 SLURP1P55000 103 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 NPEPPSP55786 919 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PPP2CBP62714 309 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PPP2CAP67775 309 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 HHEXQ03014 270 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 DUSP2Q05923 314 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ADRM1Q16186 407 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 HS1BP3Q53T59 392 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 PPP4R4Q6NUP7 873 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 NOL8Q76FK4 1167 aaKnown RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 C11orf96Q7Z7L8 435 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ZNF761Q86XN6 746 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 FMNL3Q8IVF7 1028 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 LRRC56Q8IYG6 542 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 CMTR2Q8IYT2 770 aaKnown RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 AOPEPQ8N6M6 819 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 GLB1L3Q8NCI6 653 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 NGDNQ8NEJ9 315 aaKnown RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 NUDT10Q8NFP7 164 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ZNF480Q8WV37 535 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 TTC17Q96AE7 1141 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms