RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 LAMP5Q9UJQ1 280 aa5.57□□□□□ -1.52
SNHG1-201ENST00000535076 STRIP2Q9ULQ0 834 aa5.57□□□□□ -1.52
SNHG1-201ENST00000535076 TTF2Q9UNY4 1162 aaKnown RBP5.57□□□□□ -1.52
SNHG1-201ENST00000535076 PCDHB6Q9Y5E3 794 aa5.57□□□□□ -1.52
SNHG1-201ENST00000535076 EPN1Q9Y6I3 576 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-201ENST00000535076 CLASP1Q7Z460 1538 aa5.57□□□□□ -1.52
SNHG1-201ENST00000535076 POLR3AO14802 1390 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 A0A0J9YVX5 310 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ARHGAP10A1A4S6 786 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 H3BQV1 296 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 GOLGA8RI6L899 631 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 HIP1O00291 1037 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ENPP3O14638 875 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ZBTB14O43829 449 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 FGF18O76093 207 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 LMNAP02545 664 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ASLP04424 464 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ALOX5P09917 674 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CCDC192P0DO97 292 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CALM1P0DP23 149 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CALM2P0DP24 149 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CALM3P0DP25 149 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PDHBP11177 359 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 MTHFD1P11586 935 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PCNAP12004 261 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 GLULP15104 373 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 VCLP18206 1134 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 FSTP19883 344 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 FUT4P22083 530 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PDE6BP35913 854 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ECE1P42892 770 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PREPP48147 710 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ETV1P50549 477 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ZNF75DP51815 510 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 AP3M2P53677 418 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ADAM9Q13443 819 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PRKG1Q13976 671 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PDE1CQ14123 709 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 PSMD6Q15008 389 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 UBE3CQ15386 1083 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CNGA2Q16280 664 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 MAP3K11Q16584 847 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 IFI16Q16666 785 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 LEXMQ3ZCV2 418 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 SUPT20HL1Q3ZLR7 823 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ODR4Q5SWX8 454 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CCNJQ5T5M9 372 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TATDN1Q6P1N9 297 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 WDR93Q6P2C0 686 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 C16orf54Q6UWD8 224 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 IKBIPQ70UQ0 350 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ANO5Q75V66 913 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CEP68Q76N32 757 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 KRT27Q7Z3Y8 459 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 FAM124AQ86V42 546 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CCNJLQ8IV13 435 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 IFNL2Q8IZJ0 200 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 KIRREL3Q8IZU9 778 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CAGE1Q8TC20 777 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ASAP3Q8TDY4 903 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ATP8B4Q8TF62 1192 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 HERVK_113Q902F9 699 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 WNT8BQ93098 351 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 RBM18Q96H35 190 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TNIP3Q96KP6 325 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ART5Q96L15 291 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 GAL3ST1Q99999 423 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 SIKE1Q9BRV8 207 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CARD9Q9H257 536 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 EPB41L1Q9H4G0 881 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 HAUS4Q9H6D7 363 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TRPC7Q9HCX4 862 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 C8orf4Q9NR00 106 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ZNF277Q9NRM2 450 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TAS2R7Q9NYW3 318 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 EHD2Q9NZN4 543 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 CTTNBP2NLQ9P2B4 639 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 DBF4Q9UBU7 674 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 SEC63Q9UGP8 760 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 ANAPC5Q9UJX4 755 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 DUSP12Q9UNI6 340 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 GNEQ9Y223 722 aaKnown RBP5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TMEM5Q9Y2B1 443 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 L3MBTL1Q9Y468 752 aa5.56□□□□□ -1.52
SNHG1-201ENST00000535076 TRAV6A0A075B6T7 132 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 CYP2D7A0A087X1C5 515 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-201ENST00000535076 PVALEFA0A1B0GWK0 134 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 SOWAHDA6NJG2 315 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 NOTOA8MTQ0 251 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 TMEM114B3SHH9 223 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 IGF2BP3O00425 579 aaKnown RBP eCLIP5.55□□□□□ -1.52
SNHG1-201ENST00000535076 APOL1O14791 398 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 NCAM2O15394 837 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 ADCY3O60266 1144 aa5.55□□□□□ -1.52
SNHG1-201ENST00000535076 USP2O75604 605 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms